Frieseomelitta varia: 122537438
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Entry
122537438 CDS
T09482
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
fvi
Frieseomelitta varia
Pathway
fvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122537438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fvi03041
]
122537438
Spliceosome [BR:
fvi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
122537438
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
PRP4
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_SCAP
WD_LRWD1
Ge1_WD40
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_Nup120_160
WD40_like
Tlp
Motif
Other DBs
NCBI-GeneID:
122537438
NCBI-ProteinID:
XP_043526526
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MSDDEDLVYVKKQKTVHYGSLEEAERARLAVVAESSEEEKDVTNLGDNVSAAATLGNIHI
SNEYMELEDEMSKDRQALLEEFERRKKARQINVSTDDSEVKKNLRQLGEPICLFGEGPAD
RRTRLRELLANLGEDAIKKKHEDEEKPSHPIERDTETTWYHEGPESLQIARSWIAAYSLP
RAKARLDKARQDLELPTATRTARRQELLKKLQALTIYCSQIGDTRPISFCQFSPNSKVLA
TASWSGLCKLWSVPDCTLLRTLKGHTCNVGCIVFHPKATITEEVVGERIGQTCVLASCAS
DGTVKLWSGGSGEEPLAEVEGHEPHRVSRLAFHPSGRFLGTCCYDASWRLWDLEQQAEVL
HQEGHARAVHCISFQGDGSVSATGGHDSFGRVWDLRTGRCIMFMEGHLKSIFGIDFSPNG
FHIATASEDNTCKIWDLRKRSCVYTIPAHTNLLSDVKYQRIEGQYLVTASYDNTAKIWSN
KTWQPLKTLPGHDGKVMSVDISSDHKFIGTSSYDRTFKLWAPENM
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgacgaagatttggtttatgtcaaaaaacagaaaactgttcattatggatct
ctcgaagaagcggagcgtgctagattggctgttgtggccgaatcttcagaagaggagaaa
gatgttacgaatttgggagataatgtcagcgctgctgctactttgggaaacattcatata
tcaaatgaatatatggagcttgaagatgaaatgtctaaagatagacaagctctcttagaa
gaatttgaacgtagaaagaaagcccgtcaaatcaatgtgtctaccgatgattcagaagta
aagaagaatttaagacaattaggagaacctatttgtctgtttggtgaagggcccgcagat
aggagaacaagattgagagaattattggctaacttgggagaagatgcaataaagaaaaag
catgaagatgaagagaaaccttctcatccaattgagagagatacagaaacaacgtggtac
catgagggaccagagtcacttcaaatagcacgttcttggatcgctgcatactcattgccc
agagcaaaggctagattggacaaagcaaggcaagacttggagttaccaacagctacacgt
acagcacgtcgtcaagagcttctgaaaaaattacaagcattaacaatttactgttctcaa
attggggatactaggccaatttctttctgtcagtttagtccaaattccaaagtgctcgct
acagcttcatggtcaggcttgtgtaaactatggtctgtacctgactgtactttgttaaga
acacttaaaggacatacttgtaatgttggctgcattgtttttcatccaaaagctactatt
actgaagaggtggtaggagagagaattggacagacttgtgtgttagcatcctgtgcttcg
gatggaacagtaaaattgtggagtggtggatctggggaggaacctttagctgaggtcgaa
ggacatgaaccacacagagtttcaagattagcatttcatccatctggtagatttcttggg
acttgttgttatgacgcatcttggcgactttgggacttggaacaacaagcagaagtctta
catcaagagggtcatgcgagagctgtgcactgcattagctttcagggtgacggtagcgta
agtgccacaggtggtcacgactcttttggtcgagtgtgggatcttcgtacaggacgatgc
attatgtttatggagggccacttgaaatctattttcggtatcgacttttctccgaatgga
tttcatatagcaacagcgagcgaagataatacttgtaaaatatgggacttacgaaagaga
tcttgcgtatatacaatacccgcgcatacaaatttattgtcagatgtgaaataccaaagg
atagaaggacagtacctggtcacagcatcgtatgacaatactgcgaaaatatggtcgaat
aaaacttggcaaccacttaaaacgttaccaggtcacgatggtaaagttatgtcagtcgat
atttcctccgatcataaattcatcgggaccagttcttacgatcgaacgtttaaattatgg
gctccagaaaatatgtaa
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integrated database retrieval system
