Frieseomelitta varia: 122537935
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Entry
122537935 CDS
T09482
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
fvi
Frieseomelitta varia
Pathway
fvi03013
Nucleocytoplasmic transport
fvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122537935
09122 Translation
03013 Nucleocytoplasmic transport
122537935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvi03019
]
122537935
03041 Spliceosome [BR:
fvi03041
]
122537935
Messenger RNA biogenesis [BR:
fvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
122537935
Spliceosome [BR:
fvi03041
]
Complex C
Other components
EJC/TREX
122537935
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
122537935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
122537935
NCBI-ProteinID:
XP_043527537
LinkDB
All DBs
Position
Unknown
AA seq
1464 aa
AA seq
DB search
MAEERSRHDSFEDACNGGKWSLLTCDVDTTVFNHKKAFHGIKMAGKVWSTDIWKAWDKHG
KNDFLKLIKHKFKEGNTAEWRRGLYELISNGIRGNIKRDNVVQTLGELTNIDAAISSAIV
DIFTLIDAEAHNEERNNFYYLVKESEKFLTDRILKERLDIDTLQDVGTLKNKNFQIKFIK
VKTKLYYKQRKFNLFREESEGYSKLVVELNQERPENEVASILEIVKSLIGYFNLDPNRVL
DILLETFENRPQDDALFIPLIRSYMSDQQVLCEVLGFKYCSTVNATPFSLQKVTALMLQH
GVIKLDDILPWLVPDDKTIIKEHEQAMKQAKEYVRKLSVISTKDKEDVPEEKENPQDKYA
SNQKFGLCEALLEIGAWEVAENLFNRLPEHSLTDQRPIALALCKMIQSLIEPVYRKHCII
SPKLQGRRIPQLKSSLAPKPIESLEDIHDQLLPMLIVLGPNLHHDPVLMYKIMRLCHAAI
KQCPLDTNKQPVDKNTLYYDVLTILDVALLPSLSFMDCNCCVAEELWNILKYYPYQNRYC
LYARWKNDTPLQHAALLRKRADAQKKIKSIMKRVSKETIKPVGRSIGKLTHSSPGVLFDY
VLIQIQLYDNLIGPVVDSLKYLTNISYDVLGYCLVEALAGADRDRFKHDGTSISLWLQSL
ASFCGAIFKKYNIELTGLLQYVANQLKAQKSLDLLILKEIVQKMAGIEAAEEMTSDQLDA
MAGGDLLKNEAGYFSQVRNTKKSSQRLKEALAEHDLAVALCLLMAQQKHCVVYRETDKSH
LKLVGKLYDQCQDTLVQFGTFLGSTMTVDEYVERLPSIHSMLQDNHIHSDVAFFLARPMF
AHAINIKYDALRKADPNYKKMSTAMKQAKYAEAAQAVMAPVAQSVRPLHPLKVWEDISPQ
FLVTFWSLSMYDLYVPVESYQREINKLKQLAAQSADSKDVNVSKGKKEQERYTTLIEKLQ
DERRKQEEHVEKVFAYLRQEKDTWFLSRSAKSAKNETITQFLQLCLFPRCTFTTVDAMYC
AKFVHTIHSLKTANFSTLLCYDRLFCDITYSVTSCTENEANRYGRFLCAMLETVMRWHSE
KAIFDKECSNYPGFVTKFRVSNQFSEANDMVGFENYRHVCHKWHYKITKAIVVCLDSKDY
VQIRNSLIILIKILPHFPVLAKLSQILERKVEKVREEERGQRQDLHVLATSYSGQLKAKT
PNMIREADFHHVGDKAGKTQDTPNSDVSEKVGDGISGKEITNGDTRLEKEKDQREKRSAS
NQLHHESSEKIRKKEESKESLEGKDKYLKKDEIKEDDTIDKKDRKYYKEEHYYGSAVDNL
DRDLSSVSNSSASSGPTQDGSDRDAKRRKVENVQKEGRRAEGSLDKKERSSKGKIRDEQK
ELRREKKFARKRDRTDESAVTNEQKRRKDDEKAKGTHQNGDIPEHREKHHYNKEKSPYTK
ERTHEREGRESRDKHRRSSDPKRR
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaaagatcgcgccacgatagcttcgaggacgcttgcaatggtggaaaatgg
agtctattaacctgtgatgttgatacaactgtttttaatcataaaaaagcttttcatgga
attaaaatggctggtaaagtgtggagtacagatatatggaaagcatgggataaacatgga
aaaaacgatttcctcaagttaatcaagcacaaatttaaggaaggcaacactgcagaatgg
agaagaggattatacgaattaatttcaaatggaatccgtggaaacataaaaagggacaat
gttgttcagacattaggtgaactaacaaatattgatgcggcaatatcatctgcgatagtg
gatatatttacactgatagacgcggaggcacataacgaagaaagaaataatttttactat
cttgtaaaagaatcagaaaagtttctcacagataggatattgaaggaacgtttagacatt
gacacattgcaagatgtaggaacattgaaaaataaaaatttccaaatcaaattcatcaaa
gtgaagacaaaattgtattataaacaacggaagtttaatttatttcgagaggaaagcgaa
ggatattctaaacttgtagtggagttgaatcaggaacgtccagaaaatgaagtagcatcg
atattggaaattgttaagtctcttatcggatattttaatctcgaccctaacagggtgctc
gatattttattagaaacttttgagaatcgacctcaagacgatgcgctttttatcccttta
attcgctcgtacatgagtgatcagcaggtactctgcgaagttttaggatttaaatattgt
tcgactgtcaatgctactccattttcattgcaaaaagttactgcacttatgttgcaacac
ggtgtcattaaattggacgatatattgccatggttagtgccagatgataagacaattatc
aaagaacacgaacaagcaatgaaacaggcgaaagaatacgttcgcaagttgagtgtaatt
tctacgaaagataaggaagacgtaccggaagagaaggaaaatccacaggataagtacgca
agtaatcaaaagttcggattatgtgaagcacttctagaaataggagcttgggaagtagca
gaaaacttatttaatcgattacctgaacacagtctcaccgatcaacgtcctattgcatta
gcgctgtgcaaaatgattcagtctcttattgaacctgtttatcgcaaacattgtataata
tcaccaaaattacaaggtagaagaattccgcaattaaagagctcccttgctccaaagcca
atcgagagtcttgaggacattcatgatcaattattaccaatgctcatagtcctcggtccc
aatctacaccatgatcccgttctgatgtacaagatcatgcgattgtgtcatgcagcaata
aaacagtgtccattagacaccaataagcaaccagttgataaaaatactttgtattacgac
gtattgactattctcgacgtggcgttattgccttcattgtcttttatggactgcaactgt
tgcgttgcagaagaattgtggaacattttaaagtactatccatatcagaatcgatactgt
ttgtatgcccgatggaagaacgacacgcctttgcagcatgctgcgcttttaagaaaaagg
gcagatgcgcaaaagaaaattaagtctattatgaaaagagtgagcaaagaaaccataaag
cccgtaggaagatcgataggcaaacttacacattcgtcacctggtgtattgttcgattac
gttcttatacaaatccagttatatgataatcttataggtcctgttgtagattccttgaaa
tatttgactaacatttcttatgatgtacttggttactgtctcgtagaagctttagctggt
gctgacagagatagatttaagcatgatggcaccagcatatctctttggctccaatccctt
gcttcattttgcggagccatatttaaaaagtataatatagaacttactggtttgctgcaa
tatgtagctaatcaacttaaagcacaaaaaagtctagatttattaatattgaaagaaata
gtacaaaagatggcaggtatcgaagccgctgaggaaatgacttcggatcaattagatgcc
atggcaggtggagatttattgaagaatgaagccggttattttagtcaagtacgcaataca
aaaaaatcatctcaacgattaaaagaagctctagctgaacatgatcttgccgtagcgcta
tgccttttaatggcacaacaaaaacactgcgttgtgtatagggaaacggataagtctcat
cttaaactcgttggtaaactgtacgatcagtgtcaagatacattagtccaatttggtact
ttcttgggatccactatgacagtagatgaatacgtggaaagacttccctccatacattct
atgctccaggacaatcatatacattctgatgtcgcattttttcttgcaagaccaatgttt
gcacacgccattaacattaagtacgatgccttgcgtaaagctgatccaaattacaaaaaa
atgtcgactgctatgaaacaagcaaaatatgcagaagctgcacaagcagttatggcacct
gttgctcaatcagtcagacctttacatccattgaaagtatgggaggatatttcgccacaa
tttctagtgacattttggtcgttgtctatgtacgatctgtatgttcccgttgagagttat
cagagagaaattaacaaattaaagcaactcgcggcacaaagcgcggattccaaagatgtg
aatgttagtaagggaaagaaagagcaagaaaggtatacgactctaattgagaaactacaa
gacgaaagaagaaagcaggaggaacatgttgaaaaagtatttgcatatctaaggcaagaa
aaagatacatggtttttatctcgaagcgcaaaatcagcgaagaatgaaacgataacgcaa
ttcctacagttatgtctctttcctcgatgtacatttacaaccgtggatgccatgtattgc
gctaaattcgttcacaccatacattctttgaagactgcgaatttttcaactcttctttgc
tatgacagacttttctgtgatataacatattcagttacctcatgtaccgaaaatgaagca
aatcgttatggaagatttttatgcgccatgctggaaacagtgatgagatggcattctgag
aaagctatattcgataaggaatgtagcaattatccgggattcgtaacgaaattccgtgtt
agcaatcaattctctgaagctaacgatatggtaggatttgaaaattatagacatgtgtgc
cacaagtggcattataaaatcacaaaggcaattgtagtttgtttggattctaaggactat
gtacaaataagaaattccttgataatattaataaaaatattgccacattttcctgtcttg
gcaaaattatcacaaattcttgaacgtaaagtagagaaagtgagagaggaagaacgtggg
caacgccaagatttacacgtcctggctacatcgtacagtggccaactaaaggccaaaact
ccgaatatgattcgcgaggcagattttcatcacgtgggggataaggctggaaaaacgcaa
gatactccaaatagtgatgtctccgagaaagttggggatggaatatcgggtaaagagatt
acaaacggcgacaccagattagagaaagaaaaagatcaacgagaaaaacgaagtgcatcg
aatcaattgcatcatgaaagttcggaaaaaattaggaaaaaggaagaaagcaaagaaagt
ctagaagggaaagacaaatatttaaaaaaggacgaaatcaaggaagatgacacgatagat
aaaaaagaccgaaaatactacaaagaggaacattattatggcagtgctgtagataattta
gaccgtgatctttctagtgtatcaaatagtagtgctagttccggaccaacacaagatgga
tcagacagagatgccaaaagaagaaaagttgaaaatgtacaaaaggaggggagacgtgcc
gaaggaagtctcgacaaaaaggaacgctcaagcaaaggcaaaataagagatgaacagaaa
gaattgcgcagagaaaagaaattcgcacgaaaaagggatagaacagatgaatcagcagtg
acaaatgaacagaaaagaagaaaagatgatgagaaagcgaaaggaacacatcaaaatggt
gatatccccgagcatagagaaaagcatcactacaacaaggaaaagtcaccctacacaaag
gagcgtactcatgaacgggaaggccgtgaaagccgggacaaacataggagaagttcggat
cctaaacggagatga
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