Frieseomelitta varia: 122538025
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Entry
122538025 CDS
T09482
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
fvi
Frieseomelitta varia
Pathway
fvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122538025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fvi03041
]
122538025
03009 Ribosome biogenesis [BR:
fvi03009
]
122538025
Enzymes [BR:
fvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122538025
Spliceosome [BR:
fvi03041
]
Complex A
U1 snRNP components
U1 related factors
122538025
Complex B
122538025
Ribosome biogenesis [BR:
fvi03009
]
Eukaryotic type
Pre-60S particles
Helicases
122538025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
PRAI
Motif
Other DBs
NCBI-GeneID:
122538025
NCBI-ProteinID:
XP_043527677
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MKMAYRDRERNDRRGGARGGGRFNGRDGSGGGGRFGSNSSRDSSFGNNNFKNRQPGERLR
KPRWDMSALLPFRKDFYQPHPNVTTRNSHVVESYRSDKEITVKGANVPGPNIFFEEGGFP
EYVLNEIHRQGFGEPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHINHQPRL
NRNDGPIALILAPTRELAQQIQQVASDFGISSQVRNTCIFGGAPKGPQARDLERGVEICI
ATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATW
PKEVRNLAEEFLTDYIQINIGSLQLAANHNILQIVDVCEEFEKEGKLMKLLEEISNEPEN
KTIIFVETKRKVDDITRAINRYGWQAIGIHGDKSQQERDYVLNQFRNSRSAILVATDVAA
RGLDVEDVKFVINLDYPSNSEDYVHRIGRTGRSQRTGTAYAFFTPNNAHKASDLIQVLEE
AKQVVNPKLYELSRNPGIYKRGRYGGRSGGGGGRGSGGRGGNSRGLRGGRDGDRSGRFDR
SNNSGGDRGNKWNGNNSSMSSNKNCMGGGNYNSKAFSQNTYGGGSGGGSSGYSQNGGYGG
SGGGGGGSSNYRQQNGY
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggcataccgtgatcgtgaacgtaatgataggagaggaggagcacgtggaggt
ggtcgtttcaatggccgagatggaagtggaggaggtggaagatttggtagtaattctagt
agagatagtagttttggaaacaataattttaaaaaccgtcaacctggagaaagacttcga
aagccaagatgggatatgagtgcattactgccatttagaaaagatttctatcagcctcat
cctaatgttacaactagaaattcacatgtagttgagtcttaccgttcagacaaagaaatc
actgttaaaggagcaaatgtaccagggccaaatatatttttcgaagaaggtggatttccg
gaatatgttttgaatgaaatccatagacaaggtttcggagaaccaactgcaattcaggca
caaggttggcctattgctttgtctggacgtgatatggttggaattgctcaaacgggatct
ggaaaaacattagcatatattttaccagcaattgtacatataaatcatcaaccaagatta
aatcgtaatgatgggcctatagctctgattttagcaccaacaagagaacttgcacagcaa
attcaacaagttgcatcagattttggtatctcatcacaagtaagaaatacatgcattttt
ggtggagctccaaaaggtcctcaagctcgtgatcttgagcgaggtgttgaaatttgtata
gcaacaccagggcgtcttattgacttcctagaacgtggtacaacaaatttacgtagatgc
acatatttagtacttgatgaggcagatagaatgcttgatatgggctttgagccacaaatt
agaaaaattgtagaacaaatccgacctgatagacaaactcttatgtggtcagcaacttgg
ccaaaggaagttcgtaatcttgcagaggaatttttaactgactatatacaaattaacatt
ggctctctgcaattagctgccaatcataacatccttcaaattgttgatgtatgtgaagaa
tttgagaaagagggtaaacttatgaaacttttagaagaaatatcaaatgaaccagaaaat
aaaactattattttcgttgagactaagaggaaagtagatgatataacacgtgcaattaat
aggtatggatggcaagcaattggcatccatggagataaaagtcaacaagaaagagattat
gtattaaatcagttccggaatagcagatctgccattctagtagctacagatgttgcagca
agaggattagatgtggaagatgttaagtttgtcataaatttggattacccgtccaattct
gaagactatgtacaccgcattggtcgtacaggacgttcacagagaacgggaaccgcatat
gcatttttcactcctaataatgcacacaaggctagtgacttaattcaagttttagaagaa
gcaaaacaagttgtaaatcccaaattgtatgaattatcaagaaatccaggcatctataaa
agaggccgttatggaggacgtagcggcggcggtggtggacgtggttctggaggccgtggt
ggtaattcccgtggtttacgaggtggtcgtgacggagataggagtggcagatttgatcgt
tctaataacagtggaggagaccgaggaaataaatggaatggcaataatagcagtatgagc
tcaaataaaaattgcatgggtggaggtaactacaatagcaaagcattttctcagaacact
tatggaggaggttccggtggaggttccagtggttacagtcaaaatggtggatatggagga
agtggaggcggaggtggaggtagcagtaattatagacaacaaaatggctattaa
DBGET
integrated database retrieval system
