Frieseomelitta varia: 122538423
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Entry
122538423 CDS
T09482
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
fvi
Frieseomelitta varia
Pathway
fvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122538423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvi03019
]
122538423
Messenger RNA biogenesis [BR:
fvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122538423
mRNA degradation factors
5'-3' decay
Decapping complex
122538423
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
122538423
NCBI-ProteinID:
XP_043528414
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Position
Unknown
AA seq
730 aa
AA seq
DB search
MADFFFGFDTSLANSGLEDGLECPFEEDDLGEEEEYDALNDETFGSEATIGDWEKDHEKL
AEITESSRHQGTSDKKNVVIDTNIEDNLSHLVLDEKEGIIPRPGVWDSPSNLALPKPRPP
LTLPSTLTNVCTVEQLEKGFIANRIPPKLNKPIQTQQQQQPKSDGSLLFESLSAAPRFPP
GLGMPPPHPVVLPPNMRFPHPQFLQHPRLLPNQTGNVLRYPIAAHYAMLPHTSQRQPIHG
SFCNNFPQPPLSNLCPPPFLRADHSIIPPFSSNQSSHQQQQHSFSHSGNQRNQNRVFHHG
EQQGNHQPFFKNNQYHRNHDRNNQRHYHYNHHCQGINGVIGSGEPYDDYAGLMSSREKQW
LINIQLLQLNTNEPYVDDYYYIVFCDRRNRQSINQEQKDKKQHNNNNNNSYHRDTRDREQ
PHHVLSKSAYTPTQFENSLGKLQYASVIAPRKVIDMDVVPNSDPQLTTQIQQKDTKRTRQ
LLLEIERLYIIQLKLEDLHNPLALLSEQNQQQNQEGETEANSHKKSSSDLISMMLSAFLQ
LIHDDKIASMLSIRKGKTLLLRFLPYLNLTEHRNQLEELWNAIFRGLAIIGRRDSHLLIS
LHSEFQRWFDTVHEFGTMLRLARSLSDSVSQPIKNNSLAFALTNKFGVSVIASMFEQAEK
LYPTDDSLSSEWSSFIVHIIEIIGETPPCVAPCRPIAANTLNQHLNRLSHLKCGRYTTLE
RLLTDANPSR
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttctttttcggttttgatacgtcacttgcaaatagcggtttagaggatggc
ctcgagtgtccgtttgaggaagatgatcttggagaagaggaagaatatgatgctttgaat
gatgaaacgtttggttctgaagccactattggcgactgggagaaggaccatgagaaactc
gcagaaattacagaatccagccgtcatcagggtacttcggacaaaaaaaatgtagtaatc
gatacaaatatcgaagataatttatcccatttggtactagatgagaaagaaggtatcatt
ccgcgtcctggagtttgggatagcccttccaacttagcccttcctaaacccagaccaccg
ttaactttaccatccactttaaccaatgtttgtactgttgaacaattggagaaaggattc
attgcaaataggataccacctaaattgaataaacctattcagacacagcaacaacaacaa
ccaaaatcagatggatcgcttttgtttgaatctttgtctgcagcaccacgctttccacca
ggcttgggtatgccacctccacatcctgttgttttaccaccaaacatgagatttcctcat
cctcaatttttacaacatcctagattattacccaatcaaactggaaatgtactaagatac
cctatagcggcccattatgcgatgttgcctcatacttctcagaggcaaccaattcatggt
tcgttttgcaataattttcctcaaccaccgctttcgaacttatgtcctcctccgttctta
cgagcagaccatagcataatacctcctttctctagcaatcagagtagtcatcagcaacag
caacattctttttcacactctggaaatcaaagaaatcaaaatagagtttttcatcatgga
gaacaacaaggaaatcatcaaccattttttaaaaataatcagtatcatcgtaaccatgat
cgaaataatcaacggcattatcattacaatcaccactgtcaaggaataaatggtgtaata
ggttcgggtgaaccatacgatgactacgccggtctcatgagtagtcgagagaaacagtgg
ttaattaatattcaattattgcaacttaacacaaacgagccgtatgttgatgattactat
tacatcgttttctgcgatagaagaaacagacaaagtataaatcaagaacaaaaagataaa
aagcaacacaataataataataataatagttatcatagagataccagagatcgtgaacaa
ccacatcacgtactttcaaaatccgcatatacgccaacacagtttgagaattctttagga
aaattacaatatgcgagtgttatagcgccacgtaaagttattgatatggatgttgtaccg
aacagcgatcctcaattaactacccaaatacagcaaaaggatacaaaacgaacaagacaa
ttattactggaaattgaaaggttatatataatccaattaaaacttgaagatctacacaat
cctttggctctgcttagtgaacaaaaccaacaacaaaaccaagaaggagagaccgaagca
aatagccataagaaaagtagttcagatttaataagtatgatgttatcggcttttcttcag
ttaatacatgatgataaaatagcaagcatgctaagtattcggaaagggaagacgctgtta
ttgaggttcttgccatacttgaatctaacggaacatcgtaatcaattagaagaattatgg
aatgcgatattccgaggattagctataataggtcgtagagattctcacctattaataagc
cttcattccgaatttcaacgttggttcgatactgtgcacgagtttggtacgatgcttcga
ctagctcggtcactatccgactccgttagtcaaccaatcaagaacaacagtttagctttt
gctctaacaaacaagtttggtgtatctgtaattgcttcgatgtttgaacaagctgaaaaa
ttatatcccacggatgattctttgtcttcggaatggtcatctttcatagtacacatcatc
gaaataattggtgaaactccaccctgtgtcgcaccttgtcgaccgattgctgcaaatacg
ctaaatcagcatttaaatcgactatctcacttaaaatgcggaagatatacaactctggaa
cgtctactaactgatgccaatccttctcgatag
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