KEGG   Frieseomelitta varia: 122538423
Entry
122538423         CDS       T09482                                 
Name
(RefSeq) protein PAT1 homolog 1
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
fvi  Frieseomelitta varia
Pathway
fvi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fvi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    122538423
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fvi03019]
    122538423
Messenger RNA biogenesis [BR:fvi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     122538423
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     122538423
SSDB
Other DBs
NCBI-GeneID: 122538423
NCBI-ProteinID: XP_043528414
LinkDB
Position
Unknown
AA seq 730 aa
MADFFFGFDTSLANSGLEDGLECPFEEDDLGEEEEYDALNDETFGSEATIGDWEKDHEKL
AEITESSRHQGTSDKKNVVIDTNIEDNLSHLVLDEKEGIIPRPGVWDSPSNLALPKPRPP
LTLPSTLTNVCTVEQLEKGFIANRIPPKLNKPIQTQQQQQPKSDGSLLFESLSAAPRFPP
GLGMPPPHPVVLPPNMRFPHPQFLQHPRLLPNQTGNVLRYPIAAHYAMLPHTSQRQPIHG
SFCNNFPQPPLSNLCPPPFLRADHSIIPPFSSNQSSHQQQQHSFSHSGNQRNQNRVFHHG
EQQGNHQPFFKNNQYHRNHDRNNQRHYHYNHHCQGINGVIGSGEPYDDYAGLMSSREKQW
LINIQLLQLNTNEPYVDDYYYIVFCDRRNRQSINQEQKDKKQHNNNNNNSYHRDTRDREQ
PHHVLSKSAYTPTQFENSLGKLQYASVIAPRKVIDMDVVPNSDPQLTTQIQQKDTKRTRQ
LLLEIERLYIIQLKLEDLHNPLALLSEQNQQQNQEGETEANSHKKSSSDLISMMLSAFLQ
LIHDDKIASMLSIRKGKTLLLRFLPYLNLTEHRNQLEELWNAIFRGLAIIGRRDSHLLIS
LHSEFQRWFDTVHEFGTMLRLARSLSDSVSQPIKNNSLAFALTNKFGVSVIASMFEQAEK
LYPTDDSLSSEWSSFIVHIIEIIGETPPCVAPCRPIAANTLNQHLNRLSHLKCGRYTTLE
RLLTDANPSR
NT seq 2193 nt   +upstreamnt  +downstreamnt
atggcagacttctttttcggttttgatacgtcacttgcaaatagcggtttagaggatggc
ctcgagtgtccgtttgaggaagatgatcttggagaagaggaagaatatgatgctttgaat
gatgaaacgtttggttctgaagccactattggcgactgggagaaggaccatgagaaactc
gcagaaattacagaatccagccgtcatcagggtacttcggacaaaaaaaatgtagtaatc
gatacaaatatcgaagataatttatcccatttggtactagatgagaaagaaggtatcatt
ccgcgtcctggagtttgggatagcccttccaacttagcccttcctaaacccagaccaccg
ttaactttaccatccactttaaccaatgtttgtactgttgaacaattggagaaaggattc
attgcaaataggataccacctaaattgaataaacctattcagacacagcaacaacaacaa
ccaaaatcagatggatcgcttttgtttgaatctttgtctgcagcaccacgctttccacca
ggcttgggtatgccacctccacatcctgttgttttaccaccaaacatgagatttcctcat
cctcaatttttacaacatcctagattattacccaatcaaactggaaatgtactaagatac
cctatagcggcccattatgcgatgttgcctcatacttctcagaggcaaccaattcatggt
tcgttttgcaataattttcctcaaccaccgctttcgaacttatgtcctcctccgttctta
cgagcagaccatagcataatacctcctttctctagcaatcagagtagtcatcagcaacag
caacattctttttcacactctggaaatcaaagaaatcaaaatagagtttttcatcatgga
gaacaacaaggaaatcatcaaccattttttaaaaataatcagtatcatcgtaaccatgat
cgaaataatcaacggcattatcattacaatcaccactgtcaaggaataaatggtgtaata
ggttcgggtgaaccatacgatgactacgccggtctcatgagtagtcgagagaaacagtgg
ttaattaatattcaattattgcaacttaacacaaacgagccgtatgttgatgattactat
tacatcgttttctgcgatagaagaaacagacaaagtataaatcaagaacaaaaagataaa
aagcaacacaataataataataataatagttatcatagagataccagagatcgtgaacaa
ccacatcacgtactttcaaaatccgcatatacgccaacacagtttgagaattctttagga
aaattacaatatgcgagtgttatagcgccacgtaaagttattgatatggatgttgtaccg
aacagcgatcctcaattaactacccaaatacagcaaaaggatacaaaacgaacaagacaa
ttattactggaaattgaaaggttatatataatccaattaaaacttgaagatctacacaat
cctttggctctgcttagtgaacaaaaccaacaacaaaaccaagaaggagagaccgaagca
aatagccataagaaaagtagttcagatttaataagtatgatgttatcggcttttcttcag
ttaatacatgatgataaaatagcaagcatgctaagtattcggaaagggaagacgctgtta
ttgaggttcttgccatacttgaatctaacggaacatcgtaatcaattagaagaattatgg
aatgcgatattccgaggattagctataataggtcgtagagattctcacctattaataagc
cttcattccgaatttcaacgttggttcgatactgtgcacgagtttggtacgatgcttcga
ctagctcggtcactatccgactccgttagtcaaccaatcaagaacaacagtttagctttt
gctctaacaaacaagtttggtgtatctgtaattgcttcgatgtttgaacaagctgaaaaa
ttatatcccacggatgattctttgtcttcggaatggtcatctttcatagtacacatcatc
gaaataattggtgaaactccaccctgtgtcgcaccttgtcgaccgattgctgcaaatacg
ctaaatcagcatttaaatcgactatctcacttaaaatgcggaagatatacaactctggaa
cgtctactaactgatgccaatccttctcgatag

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