Frieseomelitta varia: 122538605
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Entry
122538605 CDS
T09482
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
fvi
Frieseomelitta varia
Pathway
fvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122538605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvi03019
]
122538605
Messenger RNA biogenesis [BR:
fvi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122538605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
ARM_TT21
ANAPC3
TPR_8
RC-P840_PscD
TPR_1
Motif
Other DBs
NCBI-GeneID:
122538605
NCBI-ProteinID:
XP_043528769
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MSETSETQNKDIGPGVITEQERELAQNALSEFQKGAYINCLLYLNKLETLRPKDLKVMHN
KVVVECYKNDLKKTELLRKSLNAICGQMSTIDSTETIDDIEKCVMRYNQAVLLYHTKHYN
ASLQIMNRLFAFIEPMEESLAHKVCLLLIELHIVTEQPDAALSLINYIESQLISTDNSKI
SSVDKEGIIKSMKEQKEPKKEVDVVTDAFKLKLLKCKARIYLMMHQLKLCKREWKILVSM
GTPVNISTVFLKANLEYLRGNYKKAIKLLNSVTSENLDFKTCGESSAVLYYNNMACLHLA
MGKPNLACFYLRKALHENKCALESIQVKDNDTLSSRPLYTLGGNKHYELMYSLGVSLLHA
GQASVAFDCFMEVAQKLHNNPKLWLRIAECCIYCHKPTNEVDFNIPKRRKDLVQKVVGSG
IYRKIILASSLSKDIKYHSEGFPFAIPQLTLEFASLCLKNALFLLPNNNEINIPITTIAG
PQTVPLSLTAGHNLGAQHSTLISQTTAVEALNLKISVLAASAYVCLCLGDYVIALEHAKS
LLNINKLPGAYRMLGNLYAAESLIFMDKISEAIEYLKPENIQDLNTSVLIPETQDKDKEK
LDEVISKPIKMWYPTTVPTGIAVLRYNLAVAYAIRGELDKSGETLKQVWMSKGPDCDVPI
HVIMLALYIELQLGHADISRSIIKQHCPQYR
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagacgtctgaaacacaaaataaagatattggtcccggagtaataactgagcaa
gaacgtgaattggctcaaaatgcgttatctgaatttcaaaagggagcatacattaactgt
ctgttgtatttaaataaactggaaaccttaaggcccaaagacttgaaagtaatgcataat
aaagttgtagtagaatgttataagaatgatttgaagaaaacagaattattaaggaaaagc
ttgaatgcaatatgcggacaaatgtctacaatagattcgactgaaaccatagatgatatt
gagaaatgtgttatgagatataatcaagcagttttattatatcatacaaaacattataat
gcttcgcttcaaattatgaataggttatttgcttttatagagcccatggaggaatcacta
gcacataaagtatgccttctgttgatagaactacatatagtaacagaacaaccagatgca
gcattatctttaattaattatatagaaagtcaacttatatccacagataattctaaaatt
tcgtctgttgataaagaaggtataataaaatccatgaaagaacagaaggaaccaaaaaaa
gaagttgatgtagttacagatgcattcaaattgaaattattaaagtgcaaagctaggata
tatcttatgatgcatcaactgaaactatgtaaaagagagtggaagatattagtctctatg
ggtacacctgtaaatatatcaactgtatttttgaaagctaatcttgaatatttaagaggc
aattacaagaaagccattaaattactgaattctgtaacatctgagaatttagattttaag
acttgtggagagtcttctgctgtactatattataataatatggcatgtttacatcttgct
atgggtaaaccaaatttagcatgtttttatttaagaaaagctttacatgaaaataaatgt
gctctagaaagtatacaagtaaaagataacgatactttatcatcacgaccattatataca
cttggtggaaataaacattatgaattaatgtatagtttaggtgtatcactattgcatgca
ggacaagcatcagttgcttttgattgtttcatggaagttgcacaaaaacttcataacaat
cctaaattgtggttaaggattgctgaatgttgcatttattgtcataaaccaacaaatgaa
gttgactttaatattccgaaacgaaggaaagatctagtgcaaaaagttgttggtagtgga
atttataggaaaattattttagcctcttctctctccaaagatataaagtatcattctgaa
ggttttccttttgctataccacaattaacattggaatttgcctctctatgtttaaaaaat
gcattatttttactgccaaataataatgaaattaatataccaattacaacgatcgctggt
ccacaaacagtacctttatcattaacagctggtcataatttaggtgctcaacattcaact
ttaatatctcaaactactgctgtcgaagcattaaatttaaaaattagcgtactggctgca
agtgcttacgtatgcttatgccttggtgattatgttattgcgcttgaacatgctaaatca
ctattaaatattaataaattacctggagcatatagaatgttgggtaatctttacgcagca
gaaagtttaatatttatggataaaattagcgaagctattgaatatcttaaaccagaaaac
attcaagacttaaatacttctgtacttattcctgaaactcaagataaagataaagaaaaa
ttggatgaggttatttcaaagccaataaaaatgtggtacccgacaacagttcctacgggt
attgctgtactccgttataacttggctgtggcttatgcaatccgtggtgaacttgataag
tctggagaaaccttaaaacaggtttggatgtcaaagggtccagattgtgatgttcctata
catgtaataatgttagctttatatatagaattgcaattaggtcatgcagatatttcaaga
tcaataataaaacaacattgcccgcagtaccgttga
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