Frieseomelitta varia: 122538935
Help
Entry
122538935 CDS
T09482
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
fvi
Frieseomelitta varia
Pathway
fvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122538935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fvi03021
]
122538935
03041 Spliceosome [BR:
fvi03041
]
122538935
03036 Chromosome and associated proteins [BR:
fvi03036
]
122538935
Transcription machinery [BR:
fvi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
122538935
Spliceosome [BR:
fvi03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
122538935
Complex B
122538935
Complex C
U2 SnRNP specific factors
122538935
Chromosome and associated proteins [BR:
fvi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
122538935
TFTC complex
122538935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
122538935
NCBI-ProteinID:
XP_043529382
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG
IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYIPAKNVFEKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDPEARLTISSPLEAHKSNTLVYHTVGVDVGFENP
MFACLEIDYEEADSDPTGDAAIKTQQTLTLYELDLGLNHVVRKYSEPLEEHANFLVSVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANEDT
PELYITCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVDEEYDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKRVNEWKAPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDTTGQLNEYTERKKMPSEVMCMALGNVAIGEQ
RSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAKDANNSEELSPQQ
SSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRAVKLFRIKMQGNQAVLAMSSRSW
LSYYYQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQISFP
LEYTPRKFAIHSDSAHLIIIETEHNAYTEETKQQRRLQMAEEMQEAAGAEEAIVARELAE
AFLSEEPNEAVFGAPRAGPGLWASLIRIIAPTTGQTFEVHRLEQNLAALCLSLVKFANQG
DQLFLIVGIAKEFQLNPRVSSGGFLYTYKVNGDCTNLELVHKTTLDEVPLAICPYQGRVL
VGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAIGQRIYVSDVQESVYAVRYKRQENQ
LIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRLASGINDDVDEDPTGNKALWDRG
LLNGASQKADTVACFHVGETVMSLQKATLIPGGSESLVYTTLSGTVGVLVPFTSHEDHDF
FQHLEMHMRSEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSIEPAKQKSISGDLERT
SSEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatctatacaatttgactcttcaacgtgccacgggtatcacccatgcggtgcatggc
aatttctctggtagtaaaatgcaagagattttggtgtcacgtggcaagtcgttggagtta
ttaagacctgatccaaacactgggaaggttcatactttgttaactgtagaagtgtttgga
attataaggtctttaatggcctttagattgactggtggtacgaaagactatattgttgtt
gggtctgattctgggcgcattgtaattctggagtacatccctgccaaaaatgtgttcgag
aaggtacatcaagagacgttcggcaagagtggatgtagacgcattgtacctggacaatac
ttagccatagatccaaaagggagagctgtaatgataggtgcaatcgagaagcagaaactt
gtttacattttaaatagagatccagaagctcgtcttacaatttcctcccctttggaagca
cacaagagcaatacattggtttatcatactgtaggggtagacgtgggttttgaaaatcct
atgtttgcctgtctagaaatcgattacgaggaagctgacagcgaccctacgggagatgca
gcgataaagacacaacaaacgttaactttgtacgagcttgatttgggtttgaatcatgtt
gtacgcaagtatagcgaacctctggaagagcacgcaaattttctcgtctctgttccggga
gggaacgatggaccgagtggcgttcttatttgttctgaaaattatctgacgtacaaaaat
ttaggagaccagcacgacattcgttgccctattccgcgaagacgtaatgacttggacgat
ccggagagaggcatgatattcgtgtgttctgctactcataagactaagagcatgtttttt
ttcttggctcaaacggaacaaggcgatatttttaagattacactcgagacagacgaagac
atggtgactgaaattaaattgaaatactttgatactgtacctgttgcggcaagcatgtgc
gttttgaaaaccggtttcttatttgtagcttcggaatttggcaaccattacctttaccaa
attgcacatttaggagatgatgacgacgaaccggaattcagctctgccatgccattggaa
gaaggtgacacgttcttttttgcaccgaggccgcttaggaatttagtattggtcgatgaa
atggacagcttatcgccgataatggcgtgtcaggtagcagatttagcaaatgaggatact
ccagaattatatataacgtgtggtagagggcctcggtctacattacgagtgttacggcat
ggtttggaagtatctgaaatggcggtcagcgaactgcctggtaatccaaacgctgtgtgg
actgttaaaagaagagtcgatgaggagtatgatgcttacatcatagtgtccttcgtcaat
gctactcttgtacttagtatcggagaaacagtagaggaagtgactgattctggatttctt
ggtactacaccaacgctcagttgttccgctttgggagaagatgccctagttcaagtatat
cctgatgggatacgtcacattcgagcagacaaacgtgtaaacgaatggaaagctcctggt
aaaaagaccatagtgaagtgtgcagtgaatcaacgacaggttgtgattgcactcactgga
ggagagttggtatacttcgagatggataccacgggtcagctgaatgaatatacggaacga
aagaaaatgccgtcggaagtgatgtgcatggctctgggcaacgtggcaatcggtgaacag
agatcgtggtttttggctgtcggccttcaagacaatacagtgaggattatttccctggat
ccttcggattgtctggcacccaggagcatgcaagctctaccggcagccgcggaaagtttg
tgcatcgtcgagatgggtgccaaagatgcgaacaattccgaggagctgtcgccgcaacag
tccagtctttacttaaacataggtttgcaaaatggcgttttgctgagaacggtattggat
ccgatttcgggtgatctcgctgacacgcgaacgcgataccttggctcccgagccgtcaaa
ttgttcaggataaaaatgcagggcaatcaagcggtgctggcgatgagcagccgatcgtgg
ctgagttactactatcaaaatcgtttccacttaacgccgctgtcctacgagagtctggaa
ttcgcctcgggcttcagctccgaacagtgtccggagggaatcgtggccatttcgaccaac
acgcttcggattctcgcccttgagaaactcggcgctgtgttcaatcagatcagcttcccg
ctggagtacacgccgaggaaatttgcgattcactcggattccgcgcacctgataatcatc
gagacggagcacaacgcttacacagaggagacgaagcagcagagaaggttacaaatggca
gaggagatgcaagaagccgcaggagccgaagaggctatcgtagcgagagaactggcggag
gctttcttgtccgaagagccgaatgaagctgtgtttggcgcgccaagagccgggccaggt
ttatgggcgtcgttaatcaggataatagcccctacaacagggcaaacgttcgaagtgcat
cgactcgaacagaatctagctgctctatgtttgagcctcgtgaagtttgccaatcaggga
gatcagttgtttctcattgttggtatcgcgaaggaattccagctgaatccaagagttagc
agcggaggttttctatacacgtacaaagtaaacggtgactgtaccaatctcgaattggtg
cacaaaactactttggatgaagtacccctggccatatgtccgtaccaaggaagggtgttg
gtcggtgtcggtagaatgttacgtttgtacgacatggggaaaaagaagttgttgagaaaa
tgcgagaacaaacatattcccaacgctgttgtttccatcaacgcgattggacaaagaatc
tacgtgagcgatgtacaagagtccgtgtacgctgtcagatataaacgtcaagagaatcaa
ctcatcgtgttcgccgacgatacgcacccgaggtggataacgacaacgtgcgtgctggat
tatgacactgttgctaccgctgataaatttgggaacattgctgttatacgtttggcaagt
ggaattaacgacgatgtggacgaagatccaactgggaataaggctttatgggacaggggt
ttgttaaacggggccagtcaaaaggcggacacagttgcttgctttcacgttggcgaaact
gttatgtcgttgcaaaaggcgactcttattcccggcggttccgagagtttggtgtacacc
acactaagcgggactgttggcgttctcgttccgttcacgagccacgaggatcacgatttt
ttccaacatttggagatgcacatgcgctcagagcatccgccactctgcgggagagatcat
ttgtcgttcaggtcgtactattatccggtgaagaacgttatagacggtgatctttgcgag
caattcaattccatcgaaccggcgaaacagaaaagtatatctggtgatctcgaacgaaca
tcttccgaagtgtcgaagaaactcgaggatattcgtacgcgatatgctttctaa
DBGET
integrated database retrieval system