Frieseomelitta varia: 122539203
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Entry
122539203 CDS
T09482
Name
(RefSeq) DEAD-box helicase Dbp80
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
fvi
Frieseomelitta varia
Pathway
fvi03013
Nucleocytoplasmic transport
fvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122539203
03015 mRNA surveillance pathway
122539203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvi03019
]
122539203
Enzymes [BR:
fvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122539203
Messenger RNA biogenesis [BR:
fvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122539203
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
CSN3-like_C
Motif
Other DBs
NCBI-GeneID:
122539203
NCBI-ProteinID:
XP_043529863
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MSSTEVDWGKYVDEQEKLSAKVSSLNIDKEVKENAANTDSKNDDGVDEQISPAEKSLLQK
IIRKGLVETTQDIEIQRKDPSSPLYSVKTFEALHLKPALLKGVYAMGFNAPSKIQETALP
TLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDTTKNYPQVLCLSPTYELAIQTGEVAAK
MSAFCNEIKIKYAVRGEEISRGSKITEHIIIGTPGKVLDWAVKFKFFSLSKISVFVLDEA
DVMIATQGHQDQCIRIHKQLPRTCQMMFFSATYEPEVMKFAEIIVNNPLIIRLLKEEESL
DNIKQYYVKCKDLDEKYAAITNIYGVITIGQAIIFCHTRKTANWLAERMTKDGHAVAVLS
GELTVEQRISVLDRFRAGLEKVLITTNVLARGIDVEQVTIVVNFDLPMDQNRQADCETYL
HRIGRAGRFGKSGIAINLVDSSHAMQLCKDIEKHFGKKIQYLDAEDADEIEKIGV
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgactgaagttgactggggtaaatatgtggatgaacaagagaaattgtctgca
aaggtatctagtctaaatatagataaggaagttaaagaaaatgcggcgaatacagattct
aaaaatgatgatggagtagatgagcaaatctcaccagcggagaagtcgttacttcaaaag
attatacgtaaaggtttagtagaaacaacacaggacatagaaattcaaagaaaggatccg
tcttcacctttgtatagcgttaaaacatttgaagctcttcatcttaaaccagcattatta
aaaggagtgtatgcaatgggatttaatgctccatcaaaaattcaagaaaccgcactacct
accttacttgctgatccaccacaaaatatgattgctcaatcacaatctggaactggtaaa
acagcggcatttgtattagcaatgctcagcagagttgatactaccaaaaattatcctcaa
gtactttgtttgtcaccaacttatgaactagctatacaaacaggagaagtagcagcaaaa
atgtctgcattctgtaatgaaataaaaataaaatatgctgtaagaggagaagaaataagt
cgtggatcaaagattacagaacacataatcattggaacaccaggaaaagttttagattgg
gctgttaaatttaaattctttagtttaagtaaaatatcagtttttgttctagacgaagca
gatgtgatgatcgcgacacaaggtcatcaagaccaatgtatacgtattcataagcaactt
ccacgcacatgtcaaatgatgtttttctctgcaacatatgaaccagaagtgatgaagttt
gcagaaattatagttaacaatcctttgataataagattattgaaagaagaagaaagttta
gataatattaaacaatattatgtaaaatgcaaggatctggatgaaaaatatgcagctatt
accaatatatatggtgtaataacaataggacaggcaattattttttgtcatactaggaaa
acagctaattggttggctgaaagaatgacaaaagatggtcacgcagtagctgttttatct
ggagaactgacagttgaacaaagaatttcagttttagatcgttttagagctggtcttgaa
aaggttcttattacgactaatgttttagccagaggtattgatgtcgaacaagtaacaata
gttgtcaattttgatttaccaatggatcaaaatcggcaagcagattgtgaaacgtattta
catagaattggtcgtgctggacgttttggtaaatctggaattgccattaatttagtagac
tcgtcgcatgcaatgcaattatgtaaggacatagaaaaacattttggaaagaaaatacaa
taccttgatgccgaagatgcggatgaaatagaaaaaataggagtctag
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