Fusarium venenatum: FVRRES_00635
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Entry
FVRRES_00635 CDS
T09539
Name
(RefSeq) uncharacterized protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
fvn
Fusarium venenatum
Pathway
fvn03018
RNA degradation
fvn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fvn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FVRRES_00635
09123 Folding, sorting and degradation
03018 RNA degradation
FVRRES_00635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvn03019
]
FVRRES_00635
03041 Spliceosome [BR:
fvn03041
]
FVRRES_00635
Messenger RNA biogenesis [BR:
fvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
FVRRES_00635
mRNA degradation factors
5'-3' decay
Lsm complex
FVRRES_00635
Spliceosome [BR:
fvn03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
FVRRES_00635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
37252279
NCBI-ProteinID:
XP_025587843
LinkDB
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Position
I:complement(1674041..1674586)
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AA seq
151 aa
AA seq
DB search
MATLGGYLNSETPLLELYRPHQLANTHQEKVLIVTADSRILVGTMAACDQTTNLVLNNAV
ERIIRTPDDDEPSAQVPLGLYLVRGDNVCSIGLVDEALDDSINWTEVKGSAIGAESRFCY
TFSTFFYFTYVCLLGVQHPRLENWESPVPWH
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atggctaccctgggcggatatcttaacagtgagacacccctccttgagctctaccgacct
catcagcttgctaacacccaccaagagaaggtcttgatcgtcacagccgactctcgtatt
ctagtcggcacaatggcagcatgtgaccaaacaaccaacctggttctgaacaacgccgtg
gaacgaattatccgaacccccgacgacgacgagccctcagctcaagtaccccttggtctt
tacctcgtgcgcggtgataacgtatgctcgatcggcctcgtagatgaggcgctcgatgat
agcatcaactggacagaagtcaagggttcagcgattggcgcggaaagcagattttgctac
acattctcaacctttttctatttcacgtatgtttgtttgcttggggtacagcatccacgg
ctggagaactgggagtctcctgtcccgtggcactga
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