KEGG   Fusarium venenatum: FVRRES_00635
Entry
FVRRES_00635      CDS       T09539                                 
Name
(RefSeq) uncharacterized protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
fvn  Fusarium venenatum
Pathway
fvn03018  RNA degradation
fvn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fvn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FVRRES_00635
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FVRRES_00635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fvn03019]
    FVRRES_00635
   03041 Spliceosome [BR:fvn03041]
    FVRRES_00635
Messenger RNA biogenesis [BR:fvn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     FVRRES_00635
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     FVRRES_00635
Spliceosome [BR:fvn03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    FVRRES_00635
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 37252279
NCBI-ProteinID: XP_025587843
LinkDB
Position
I:complement(1674041..1674586)
AA seq 151 aa
MATLGGYLNSETPLLELYRPHQLANTHQEKVLIVTADSRILVGTMAACDQTTNLVLNNAV
ERIIRTPDDDEPSAQVPLGLYLVRGDNVCSIGLVDEALDDSINWTEVKGSAIGAESRFCY
TFSTFFYFTYVCLLGVQHPRLENWESPVPWH
NT seq 456 nt   +upstreamnt  +downstreamnt
atggctaccctgggcggatatcttaacagtgagacacccctccttgagctctaccgacct
catcagcttgctaacacccaccaagagaaggtcttgatcgtcacagccgactctcgtatt
ctagtcggcacaatggcagcatgtgaccaaacaaccaacctggttctgaacaacgccgtg
gaacgaattatccgaacccccgacgacgacgagccctcagctcaagtaccccttggtctt
tacctcgtgcgcggtgataacgtatgctcgatcggcctcgtagatgaggcgctcgatgat
agcatcaactggacagaagtcaagggttcagcgattggcgcggaaagcagattttgctac
acattctcaacctttttctatttcacgtatgtttgtttgcttggggtacagcatccacgg
ctggagaactgggagtctcctgtcccgtggcactga

DBGET integrated database retrieval system