KEGG   Fusarium venenatum: FVRRES_01780
Entry
FVRRES_01780      CDS       T09539                                 
Name
(RefSeq) uncharacterized protein
  KO
K14328  regulator of nonsense transcripts 3
Organism
fvn  Fusarium venenatum
Pathway
fvn03013  Nucleocytoplasmic transport
fvn03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:fvn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    FVRRES_01780
   03015 mRNA surveillance pathway
    FVRRES_01780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fvn03019]
    FVRRES_01780
Messenger RNA biogenesis [BR:fvn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     FVRRES_01780
   mRNA cycle factors
    P-body specific factors
     FVRRES_01780
SSDB
Motif
Pfam: Smg4_UPF3 RRM_1
Other DBs
NCBI-GeneID: 37253424
NCBI-ProteinID: XP_025588988
LinkDB
Position
I:complement(5045381..5047561)
AA seq 670 aa
MSAQTPQVLSRRANGGSQASANQNSESTKGKWPQENSSHGKGRGRGSNARSAETNKPTNE
GETPKPTKTKAHNEGEKLTIRRLPPGMTEAEFTSILGSEWEVGKGKVDWFCFAEGKISTD
PSKPSRPGRAYVHVMRKDDILPLSEAVRNAVWEDAKVSFNSPSLIGPPVLDFAIYKKVPS
AKKRTDARQGTIDQDPDFMAFLEELANPTPPKETVDGEEGDDLGKAENKVTTTPLIEYLK
EKKAKNVKDGTSSKHSKHGQGESRSGKGKSTSKEDESGKKRGKDSKPDKADRMPKETVKI
LTKKAASEQSVDSPKANSKSQANDASAQEAAPKSRRAGILAAARILQRDLGLSPGSAHRK
ARQDAAKADVDAKTTPEKEKPAPTDAKASNSEPPASPVRANEAEAPVAKGRGAAGNSNKQ
QQPNRRTRGGKNADKNKERDNEKDNTREKDKSKGGHSGQNQAAPSPPIVLLKKKGNEAES
SQPAKPAASTPQPPTTQGGRSKADNTAGSPKGASNKGASAQKKAPAVSPGATRGFVKHAN
PSQGVTEALLKQTLSTFGTITFVEIDKRKGFAYVDFAEHDGLVKAVTASPITVAQGTVQV
LERKDKKPTNVNAPTPTPTTTPAAGSPATEKTSGRGRRGRGGGSKAKDSGGSNQGATAAN
SNSNPTNGGG
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgtcagctcagacaccacaagtattgtctagacgggcaaatgggggttcccaagcatca
gcgaatcagaattctgaatcaacaaagggcaagtggccgcaagagaatagttctcatgga
aagggcaggggaagaggttctaatgcgagatctgccgagacgaacaagcctacaaatgaa
ggcgagactcccaagcccaccaaaactaaagcgcataatgagggtgagaaactcacgata
cgccgtttgcctcctggaatgacggaggcagaattcacatccatactcggaagcgagtgg
gaggtgggcaaaggcaaggttgattggttttgtttcgcagaaggaaagatctctacagac
ccctcaaaaccttctcggccaggtcgtgcttacgttcatgtcatgagaaaggatgatatc
ctgccactgagcgaagcagtacggaatgccgtctgggaagatgcaaaggtttcattcaac
agcccgtccctgatcggacccccggtacttgactttgccatttataagaaggtcccaagc
gctaaaaaacgaactgatgcacgtcaagggaccatcgaccaagatcctgatttcatggct
ttcttagaagaacttgcaaacccaacaccaccaaaggaaaccgttgacggcgaagagggt
gacgatcttggaaaggcagagaataaagttacgacgacaccacttatcgaatatctcaag
gaaaaaaaggcaaagaatgttaaggatggcacgtcttctaaacactctaagcacgggcaa
ggagagtcgagaagtggaaagggtaagagtacgtctaaggaggatgaatccggaaagaag
agaggcaaagattccaaacccgacaaagcagacaggatgcccaaggagactgttaagatt
cttactaagaaggcagcttccgaacagagtgtggacagtccgaaagccaactccaaaagc
caagccaacgacgccagcgctcaggaggcagcgcccaagagccgacgcgcgggaattttg
gctgctgcgaggatcctacaacgagaccttggcctcagtcctggaagtgcgcacaggaaa
gcacgccaagacgctgccaaagcagatgtcgatgcgaagacgacaccagaaaaggaaaaa
ccagcccccacagatgctaaagctagcaattctgagcccccagcttcgccagtcagagcg
aacgaggctgaagccccggttgcaaagggcagaggcgccgctgggaactccaacaaacag
caacaaccgaaccgcagaacgcgtggtggtaagaacgcagacaagaacaaggaaagggat
aatgagaaggacaacaccagagagaaggataagagcaaaggggggcattcaggacaaaac
caagccgcgcccagtcccccgattgttcttctcaagaagaagggcaacgaagctgaatct
agtcagccagcgaaaccagcggccagcacacctcagccaccgaccactcagggaggtaga
tcgaaagccgacaatacagctggtagccccaaaggtgcttctaacaagggagccagcgcc
cagaagaaggcccctgctgtttctcctggtgctactcgtggcttcgtcaagcatgccaac
ccttctcagggagtcaccgaggcactactcaagcagacactttcgacattcggaactatc
actttcgttgagatcgacaagcgcaaaggctttgcctatgttgactttgctgagcacgac
ggtctcgtaaaggccgtcacagcaagccccattaccgtggcacagggcactgttcaagtt
ctggaacgcaaggataaaaagcctaccaatgtgaacgcgcctacacctacgcctacgaca
acaccggctgctggatcccctgcgacagagaagacatctggcagaggtagacgtgggcga
ggtggaggcagcaaggcaaaggactctggcggtagtaaccagggcgctactgccgccaac
tccaattccaacccaacgaatggcggcggctga

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