Fusarium venenatum: FVRRES_01780
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Entry
FVRRES_01780 CDS
T09539
Name
(RefSeq) uncharacterized protein
KO
K14328
regulator of nonsense transcripts 3
Organism
fvn
Fusarium venenatum
Pathway
fvn03013
Nucleocytoplasmic transport
fvn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fvn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
FVRRES_01780
03015 mRNA surveillance pathway
FVRRES_01780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvn03019
]
FVRRES_01780
Messenger RNA biogenesis [BR:
fvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
FVRRES_01780
mRNA cycle factors
P-body specific factors
FVRRES_01780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
37253424
NCBI-ProteinID:
XP_025588988
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Position
I:complement(5045381..5047561)
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AA seq
670 aa
AA seq
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MSAQTPQVLSRRANGGSQASANQNSESTKGKWPQENSSHGKGRGRGSNARSAETNKPTNE
GETPKPTKTKAHNEGEKLTIRRLPPGMTEAEFTSILGSEWEVGKGKVDWFCFAEGKISTD
PSKPSRPGRAYVHVMRKDDILPLSEAVRNAVWEDAKVSFNSPSLIGPPVLDFAIYKKVPS
AKKRTDARQGTIDQDPDFMAFLEELANPTPPKETVDGEEGDDLGKAENKVTTTPLIEYLK
EKKAKNVKDGTSSKHSKHGQGESRSGKGKSTSKEDESGKKRGKDSKPDKADRMPKETVKI
LTKKAASEQSVDSPKANSKSQANDASAQEAAPKSRRAGILAAARILQRDLGLSPGSAHRK
ARQDAAKADVDAKTTPEKEKPAPTDAKASNSEPPASPVRANEAEAPVAKGRGAAGNSNKQ
QQPNRRTRGGKNADKNKERDNEKDNTREKDKSKGGHSGQNQAAPSPPIVLLKKKGNEAES
SQPAKPAASTPQPPTTQGGRSKADNTAGSPKGASNKGASAQKKAPAVSPGATRGFVKHAN
PSQGVTEALLKQTLSTFGTITFVEIDKRKGFAYVDFAEHDGLVKAVTASPITVAQGTVQV
LERKDKKPTNVNAPTPTPTTTPAAGSPATEKTSGRGRRGRGGGSKAKDSGGSNQGATAAN
SNSNPTNGGG
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctcagacaccacaagtattgtctagacgggcaaatgggggttcccaagcatca
gcgaatcagaattctgaatcaacaaagggcaagtggccgcaagagaatagttctcatgga
aagggcaggggaagaggttctaatgcgagatctgccgagacgaacaagcctacaaatgaa
ggcgagactcccaagcccaccaaaactaaagcgcataatgagggtgagaaactcacgata
cgccgtttgcctcctggaatgacggaggcagaattcacatccatactcggaagcgagtgg
gaggtgggcaaaggcaaggttgattggttttgtttcgcagaaggaaagatctctacagac
ccctcaaaaccttctcggccaggtcgtgcttacgttcatgtcatgagaaaggatgatatc
ctgccactgagcgaagcagtacggaatgccgtctgggaagatgcaaaggtttcattcaac
agcccgtccctgatcggacccccggtacttgactttgccatttataagaaggtcccaagc
gctaaaaaacgaactgatgcacgtcaagggaccatcgaccaagatcctgatttcatggct
ttcttagaagaacttgcaaacccaacaccaccaaaggaaaccgttgacggcgaagagggt
gacgatcttggaaaggcagagaataaagttacgacgacaccacttatcgaatatctcaag
gaaaaaaaggcaaagaatgttaaggatggcacgtcttctaaacactctaagcacgggcaa
ggagagtcgagaagtggaaagggtaagagtacgtctaaggaggatgaatccggaaagaag
agaggcaaagattccaaacccgacaaagcagacaggatgcccaaggagactgttaagatt
cttactaagaaggcagcttccgaacagagtgtggacagtccgaaagccaactccaaaagc
caagccaacgacgccagcgctcaggaggcagcgcccaagagccgacgcgcgggaattttg
gctgctgcgaggatcctacaacgagaccttggcctcagtcctggaagtgcgcacaggaaa
gcacgccaagacgctgccaaagcagatgtcgatgcgaagacgacaccagaaaaggaaaaa
ccagcccccacagatgctaaagctagcaattctgagcccccagcttcgccagtcagagcg
aacgaggctgaagccccggttgcaaagggcagaggcgccgctgggaactccaacaaacag
caacaaccgaaccgcagaacgcgtggtggtaagaacgcagacaagaacaaggaaagggat
aatgagaaggacaacaccagagagaaggataagagcaaaggggggcattcaggacaaaac
caagccgcgcccagtcccccgattgttcttctcaagaagaagggcaacgaagctgaatct
agtcagccagcgaaaccagcggccagcacacctcagccaccgaccactcagggaggtaga
tcgaaagccgacaatacagctggtagccccaaaggtgcttctaacaagggagccagcgcc
cagaagaaggcccctgctgtttctcctggtgctactcgtggcttcgtcaagcatgccaac
ccttctcagggagtcaccgaggcactactcaagcagacactttcgacattcggaactatc
actttcgttgagatcgacaagcgcaaaggctttgcctatgttgactttgctgagcacgac
ggtctcgtaaaggccgtcacagcaagccccattaccgtggcacagggcactgttcaagtt
ctggaacgcaaggataaaaagcctaccaatgtgaacgcgcctacacctacgcctacgaca
acaccggctgctggatcccctgcgacagagaagacatctggcagaggtagacgtgggcga
ggtggaggcagcaaggcaaaggactctggcggtagtaaccagggcgctactgccgccaac
tccaattccaacccaacgaatggcggcggctga
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