Fusarium venenatum: FVRRES_03333 Help Entry FVRRES_03333      CDS       T09539                                  Name (RefSeq) uncharacterized protein   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism fvn  Fusarium venenatum Pathway fvn03013   Nucleocytoplasmic transport fvn03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:fvn00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     FVRRES_03333    03015 mRNA surveillance pathway     FVRRES_03333  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:fvn03019]     FVRRES_03333 Enzymes [BR:fvn01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      FVRRES_03333     5.6.2.5  RNA 5'-3' helicase      FVRRES_03333 Messenger RNA biogenesis [BR:fvn03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      FVRRES_03333    mRNA cycle factors     Common to processing body (P body) and stress granule      FVRRES_03333 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UPF1_Zn_bind AAA_12 AAA_11 UPF1_1B_dom AAA_30 AAA_19 ResIII DEAD UvrD-helicase Helicase_RecD Viral_helicase1 PIF1 ATPase NPHP3_N SLFN-g3_helicase nSTAND3 SRP54 AAA_22 AAA_25 TraI_hel_assoc_N PhoH Motif Other DBs NCBI-GeneID:  37254974 NCBI-ProteinID:  XP_025590538 LinkDB All DBs Position I:9228402..9231706 Genome browser AA seq 1083 aa AA seqDB search MEGAFTHVGNHLISDSAAAIKAGADDLSTIDPDESLLYAKYGDRNGRRRADDDDNQTEVF EEDDNDSINSVPVDGLNRLKLKGQDEEKELPAHACAYCGIHSPGCVVKCLTCNKWFCSAR GNGTSTHIVNHLVRARHKEVQLHPESTLGDTVLECYNCGTKNAFLLGFIPAKSDTVVVLL CRQPCAANTSNKDMNWDTSRWQPLIEERAFLPWLVATPSDSEQLRARHLTPNMIAKLEEM WKIEPKATVVDLEKAASIDDDPQPVLLNYDDPYHYQNIFGPLVKMESDYDKKLKEAQSED GLLVRWDYGLNNKHLVSFNLHKIESGDVKLAVGDEMRLRYKGELRSPWEGVGYVIKIPNN QSDEVTLELRKTGNEKLVPTDLSHNFSADYVWKATSYDRMQLAMKTFAVDDMSVSGYIFH TLLGHEVQLQVMKTNLPKKWSAPGLPDLNPSQVGAIKAVLQKPLSLIQGPPGTGKTVTSA TIIYHLAKMSGNQVLVCAPSNVAVDQLCERVHRTGLKVVRLTAKSREDVESSVSFLALHE QVRMSEHNSELVKLSQLKNELGELSSQDEKKYKQLTKIAERDILNNADVVCCTCVGAGDP RLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQS LFERLVNLKLSPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTHENRLRKDVDFPWPVGE MPMMFWSNLGHEEISASGTSYLNRTEASNVEKAVTRFFKAGVKPADIGVITPYEGQRSYI VTTMQNSGTYKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVAL TRAKYGLVILGNPKVLSKHELWHNLLVHFKDRKCFVEGPLTNLQACLLQFSRPKVSFRQK NQQPQFGAGSYSNGGRFNPPPSGRDFDSGSTVSYIPDDVSSVHGSAFGGASLNSAFPPMF SSFTPDQWPGLPGVAAPGRGGKSRGRATESVAGESVANSEYTDASSSVIGGKGVGQGGVS LGAGLHDAVTGMRPVSYSQSDRLKQYVESSGRMVPGNGYGRRFDDDEKSVSTAFHSQIGG GYD NT seq 3252 nt NT seq  +upstreamnt  +downstreamnt atggagggcgccttcacccatgttgggaatcatttgatatccgactccgctgctgctatc aaagcaggagctgatgatctttctacgatcgaccccgacgagagcttactctatgccaaa tacggagatcgaaacggccgtcgccgagctgatgatgacgacaaccaaactgaagtattc gaagaagacgataacgacagtataaacagtgtcccagtcgatggactgaatagactcaaa ctcaagggccaagacgaggagaaggaacttccggctcatgcatgcgcatattgcggcatt cactctccaggatgcgtcgtgaaatgtctcacatgcaataaatggttttgcagtgcgaga ggcaacggtacttcgacccacatcgtgaaccacctcgttcgagctcgccacaaagaagtt cagcttcaccccgagtctaccctcggcgataccgttttggaatgctacaattgcggaact aagaatgctttccttttgggcttcatcccagcaaagtctgatactgttgtcgtccttctc tgtcgacagccatgtgccgccaacacctccaacaaggacatgaattgggatacatcacga tggcaaccactgatcgaagagcgagcctttttgccatggttagttgcaacgccgtcagac tccgagcaacttagagcccgtcaccttacgccaaacatgattgccaaactggaggagatg tggaagattgaacctaaggcgacagtagttgaccttgaaaaggcagccagtattgatgat gacccccagcctgtcctactaaactatgacgatccctatcactatcagaacatcttcggc cccttggttaagatggaatctgactacgacaagaaactaaaggaagcgcaatctgaagat ggacttttggttcgttgggactatggtctgaacaacaagcatcttgtcagcttcaacctc cacaagattgaatccggtgacgtcaagcttgctgtcggcgatgaaatgcgcctacgatac aagggcgagctacgatccccttgggaaggagtcggctatgttatcaagatcccgaacaac cagtctgacgaagttacgcttgagttgcgcaagaccggaaacgagaagctcgttcccacc gacctgtctcacaacttttcggccgattatgtctggaaagcaacatcctatgaccgtatg caactggccatgaaaacgttcgctgtcgacgacatgagtgtatctggttacatttttcac accctgctgggtcatgaggttcagctgcaagttatgaagacgaatctgcctaagaagtgg tctgctcctggccttcctgacctcaaccctagccaagtcggtgcgattaaagcagttcta cagaaaccccttagtttgatccaaggacctcctggaactggcaagaccgtaacctctgcc accatcatctaccatctagccaagatgagtggaaaccaggttctagtctgcgcaccctcc aacgtcgccgtggatcagctttgcgagcgcgtccaccgcactgggctcaaggtggtccgt ctcacagccaaatcccgtgaggatgtcgaatcgtctgttagcttcttggctctccatgaa caggtccgtatgtcggagcacaacagcgagctcgtcaagctctcgcagctcaagaacgag ctgggtgagctttcaagtcaggatgagaaaaagtacaagcaactcaccaagattgccgag cgtgacattctcaacaatgccgacgttgtctgctgcacttgtgtgggtgctggtgatccc cgcctgtccaagatgaagttcagaaacgttctgatcgacgagtcaactcaatcagcagag cccgagtgtatgatcccgctcgttctcggatgcaaacaggttgtccttgtgggtgatcac aagcaacttggtcctgtcatcatgaacaagaaggctgccaaggccggtcttaaccagtca ctttttgagcgcttggtcaatctgaagctttctcctatccgactgaatattcagtaccgt atgcatccttgcctttctgaattcccttccaatatgttttacgatggtagtctgcagaat ggtgtcacccatgagaatcgcttgcgcaaggatgttgacttcccttggcctgtcggcgaa atgcccatgatgttctggtctaatttgggccacgaagaaatttctgcctcgggaacatcg tatctcaaccgcacggaagcatccaacgtcgagaaagcagtcactcgcttcttcaaggcc ggggtgaagcctgctgatattggtgtcattaccccatacgaaggccagcgaagctacatt gtgactactatgcaaaactcgggaacttataagaaggagtactacaaggaggtcgaggtc gcttcggttgatgctttccagggccgtgagaaggattttattgtcctctcctgtgtccga tccaacgacaaccaaggcattggtttcttgtccgacccccgccgtttgaacgtggcctta actcgagccaaatacggtcttgtcattcttggcaaccccaaggtcctgtccaagcacgag ctctggcacaacttgcttgtccatttcaaggatcgcaagtgcttcgtcgaaggtcccttg accaacctccaggcatgtctgctccagttcagtcgccccaaagttagtttccgacagaag aaccaacagccgcagttcggagcagggagctactccaacggagggcgtttcaacccgccc ccctcaggccgggacttcgattcaggctccacggtgtcgtatattcccgacgatgtatct tccgttcatggttctgcgtttggcggcgcttctctcaacagcgccttccctcctatgttc tcgagcttcactcccgatcaatggcctggtttaccaggtgtagctgctcctggccgagga ggcaagagccgtggtcgtgccacggaaagcgtcgcaggcgagagtgtggccaactccgag tatacggatgcatcttcaagtgttattggcggcaagggagtagggcagggcggtgtcagt cttggggcaggacttcatgatgccgtcacgggcatgcgaccagtctcctacagtcaaagc gaccgcctcaagcagtacgtcgaaagcagtggacgcatggttcccggtaacggctacggg cgacgctttgatgacgatgagaagagtgtcagcacggcattccacagccagattggagga ggttacgactga

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