Fusarium venenatum: FVRRES_05196
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Entry
FVRRES_05196 CDS
T09539
Name
(RefSeq) uncharacterized protein
KO
K12586
exosome complex component RRP43
Organism
fvn
Fusarium venenatum
Pathway
fvn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FVRRES_05196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvn03019
]
FVRRES_05196
Messenger RNA biogenesis [BR:
fvn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
FVRRES_05196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
37256835
NCBI-ProteinID:
XP_025584480
UniProt:
A0A2L2TKD2
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Position
II:complement(2173423..2174433)
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AA seq
336 aa
AA seq
DB search
MASTTGLTRSTFAKLSPHPYLLANLKPSSNDVRPARSNGRASDEARVPTVNVSSLSHANG
SAVVRVGDTTVICGVRAETILTQNIPSYRAANIETELKEYDLLVPNIELATGCAPQFLPG
GPPSTLAQTLSTRIYSLLHSSKIIKPEDLRIWHAAASEDLEADDDRMEEDDDEAPNENRS
VVAYWVLYIDIFFISFDGNPFDAAWAATMAALRDTKLPGARFDVDREMIVCSRKESRLLS
ITSTPIACTAVVFTGKETDRPTDGEFWMLVDPDRLEESLCDESVTIVVDCKDGKVNILSI
SKHGGIALTPQFLTSEQFLGWATKRWEQFNAAITQS
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaaccacaggactcactcggtctacttttgccaaactttctcctcatccgtat
ctactcgccaacctcaagccctcctccaacgatgtacgcccggctcgaagcaacggacga
gcctcagacgaggcccgcgtcccaacagtaaacgtatcaagcttgtcccatgcaaatggt
agcgccgtggtgcgtgtgggcgacaccactgttatttgcggtgtccgagccgagactatt
ttgacccaaaacattccaagctaccgcgctgccaatatcgaaaccgagctgaaagagtac
gacctgcttgttcccaacattgaactcgctacaggatgcgccccccaattcctccccggt
ggtcctccaagcactcttgctcaaactctcagcacacgaatatactctctcctccacagc
tctaagattatcaagcctgaagacctacgaatatggcatgcagcagcgtcggaagacctc
gaagccgacgacgatcgcatggaagaggatgacgacgaggcacctaatgagaatcgatct
gttgtggcctactgggtgctttacatcgacatcttctttatttcctttgacggaaaccca
tttgacgctgcttgggctgctactatggccgcactacgagatacaaagctccctggagct
cgtttcgatgtggatcgagagatgatcgtctgttcccgcaaggaatcaaggcttcttagc
atcaccagcaccccgatcgcctgcacagcagtcgtcttcactggcaaagaaaccgaccgg
cccactgacggcgagttctggatgctcgttgatcctgatagacttgaagagtcactctgc
gacgagagtgtgacgattgtggtggattgcaaggacggaaaggtcaacatcttgtctatt
tcgaagcacggaggaattgccttgactcctcagttcctcacatcagaacaattcctgggc
tgggcgacgaagcgatgggaacagttcaatgcggccatcactcagtcgtag
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