Fusarium venenatum: FVRRES_07364
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Entry
FVRRES_07364 CDS
T09539
Name
(RefSeq) uncharacterized protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
fvn
Fusarium venenatum
Pathway
fvn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fvn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FVRRES_07364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvn03019
]
FVRRES_07364
03041 Spliceosome [BR:
fvn03041
]
FVRRES_07364
Messenger RNA biogenesis [BR:
fvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
FVRRES_07364
Spliceosome [BR:
fvn03041
]
Complex B
Other components
Prp19-related factors
FVRRES_07364
Complex C
FVRRES_07364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
Mad3_BUB1_I
TPR_8
TPR_15
RPN7
ARM_TT21
AFF4_CHD
Motif
Other DBs
NCBI-GeneID:
37259003
NCBI-ProteinID:
XP_025586648
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All DBs
Position
II:complement(7630556..7633149)
Genome browser
AA seq
822 aa
AA seq
DB search
MAPIVPALSWARRQPQLHLVSNEDSVYEQDIIRDPGSVKPWLTYIEFKTRHGSILEQAYV
MERACTQLPRSYKLWKLYLSFRVKHVAKLNSALFDKEYRKVNALFEKALNLLHKMPRIWE
MYLRFLTKQPLVTLTRHVFDRALRALPITQHNRIWAIYRPFANSAAGETAVKIWRRYMQV
HPEDAEDFIELLVQNGLYTEAALKFIEVLNNTRFNSKHGKGHYELWSEMVDLLVAHAADI
ETGHETGINAERIIRSGISRFADQRGKLWSGLATYWIRRGSFERARDVFEEGITTVMTVR
DFTLIFEAYTEFEESIIGALMEVASGRAEKGVDDENADFELDIRMMRFEQLMDRRPFLLN
DVLLRQNPNNVPEWEKRVALWGDNKKEVAQTYTDAIAAIQPKRAVGAFHQLWANYAKFYE
RGGDLRNARVIMEKAIKVPFKSVAELADMWIEWAEMELRNENFDDAVRIMAKAVQAPKRS
TVDYFDETLSPQQRVHKSWKLWSFYVDLVESVSTLDETKKVYERIFELRIATPQTVVNYA
NLLEEHKYYEESFKIYERGLDLFSYPVAFELWNLYLTKAADRKIGIERLRDLFEQAVEDC
PPKFAKTIYLMYGNLEEERGLARHAMRIYERATRAVADEDRADMFNFYITKSASNFGLTS
TRPIYERAIAALPDVEAKDMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTSPDFWTKW
EQFEVQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQALARSQRQPDSAEDAEITDAMAA
LERQSRAPQGFVAASTGPVGGNPTTTTAPSNPDAIEIDGLDE
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggccccaatcgttccagccctgagttgggcgcgcagacagcctcagctgcatcttgtg
tccaacgaagactccgtttacgagcaagacatcatccgcgatcccggtagcgtcaagcca
tggcttacttatatcgaattcaagacccggcacggttcaatactcgagcaagcatatgtg
atggagcgggcctgcacccagttacctcgatcatacaaattatggaagttgtatctatca
tttcgagttaagcacgtcgccaagctgaactcagctttgttcgataaggaatatcgcaaa
gtcaacgccctctttgaaaaagctctcaacctgctccacaagatgccgcgaatatgggag
atgtaccttcggttcttgacaaagcagccactcgtcaccctgacacgacatgtattcgat
cgagccttgagagcccttcctataacacaacataatcgtatatgggccatctataggcct
tttgccaactctgctgctggagaaactgccgtgaaaatctggcgacgctacatgcaggtg
catcctgaagatgccgaagactttatcgaacttcttgtacaaaacggtctatataccgag
gctgcgctcaagtttatcgaagttctcaacaatactagattcaacagcaagcacggcaaa
ggacattacgaactctggagtgagatggttgatttgcttgtcgcgcatgcggccgacatc
gaaactggacacgaaacaggaatcaacgccgagcggattattcgaagtggtatctccagg
tttgctgaccagcgagggaagctctggtctggtctcgccacttactggattcgaagagga
agctttgagcgagcacgcgatgtgtttgaagagggcatcactacagtcatgacagttcgg
gatttcactctgatcttcgaggcatacaccgaattcgaggaatctatcatcggtgccctg
atggaagttgcatctggacgggctgaaaagggtgtcgacgatgagaacgcagattttgaa
ctcgacatccggatgatgcgtttcgaacagctgatggacaggcgtccattcctcttaaac
gacgtcctattacgccaaaaccccaacaatgtgcctgagtgggagaagcgtgtcgccctc
tggggcgataacaagaaagaggttgctcagacatacacagacgccattgcagccattcaa
ccaaagcgggctgtgggtgctttccaccaactctgggctaattatgccaagttctatgag
cgtgggggtgacctgaggaacgctcgtgttatcatggaaaaggctatcaaagtccctttc
aaatcagtagcagaactcgccgatatgtggattgaatgggcagaaatggagttacggaac
gagaacttcgatgatgccgttcgaatcatggccaaggcagttcaagcgcctaagaggtcc
accgttgactatttcgacgagactctatcaccgcaacaacgagtccacaagagttggaaa
ctgtggagtttttacgtcgacctcgtcgaaagtgtatcaacattggatgaaaccaagaag
gtttatgagcggatatttgagctccgcattgcgacacctcaaacagttgtcaactacgca
aacttgctcgaggagcataaatactatgaagagtcgttcaagatatatgagcgcggcttg
gatctctttagttatcccgttgccttcgagctttggaacctctatcttactaaagctgcc
gatcgcaagattggaatcgaacgtctgcgagatctcttcgagcaagccgtggaggattgc
cctcccaaattcgccaagacgatttacctcatgtacggtaatctagaagaggagcgtggc
ttggcgcgacatgccatgcgcatctacgagcgggccacaagggctgtcgcggacgaagat
cgagccgacatgttcaacttttatatcaccaaatctgcttccaactttggcctgacatcg
acccggccaatctacgagagagctatcgctgctcttcccgatgtcgaagccaaggacatg
tgcctcaagtttgcggatatggagaagaggttgggcgaaatcgaccgggctcgcgccatc
tatggccacgcatcgcagttctgtgatcctcgaaccagccccgacttctggaccaagtgg
gagcagtttgaggtgcagcacggcaacgaagacactttcaaggagatgctgcgcatcaag
cgaagtgtccaagcacagtacaacactgatgttaacttcattgcctctcaggctctggca
agaagccagcgccaacctgatagtgcggaggatgctgagattacagatgctatggcagca
ttggaaagacagtcaagagcacctcaaggatttgtcgcggccagtacgggcccagtagga
ggaaacccaacgacgaccaccgctccatccaatcccgatgctattgagattgatggtctt
gatgaatga
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