Fusarium venenatum: FVRRES_09428
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Entry
FVRRES_09428 CDS
T09539
Name
(RefSeq) uncharacterized protein
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
fvn
Fusarium venenatum
Pathway
fvn03013
Nucleocytoplasmic transport
fvn03015
mRNA surveillance pathway
fvn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fvn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FVRRES_09428
09122 Translation
03013 Nucleocytoplasmic transport
FVRRES_09428
03015 mRNA surveillance pathway
FVRRES_09428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvn03019
]
FVRRES_09428
03041 Spliceosome [BR:
fvn03041
]
FVRRES_09428
03009 Ribosome biogenesis [BR:
fvn03009
]
FVRRES_09428
03012 Translation factors [BR:
fvn03012
]
FVRRES_09428
Enzymes [BR:
fvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FVRRES_09428
Messenger RNA biogenesis [BR:
fvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
FVRRES_09428
mRNA cycle factors
Stress granule specific factors
FVRRES_09428
Spliceosome [BR:
fvn03041
]
Complex C
Other components
EJC/TREX
FVRRES_09428
Ribosome biogenesis [BR:
fvn03009
]
Eukaryotic type
90S particles
Helicases
FVRRES_09428
Translation factors [BR:
fvn03012
]
Eukaryotic type
Initiation factors
eIF-4
FVRRES_09428
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
TniB
Gp6_2nd
COG4_N
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
37261067
NCBI-ProteinID:
XP_025593066
UniProt:
A0A2L2TSS1
LinkDB
All DBs
Position
III:<3892843..>3894149
Genome browser
AA seq
402 aa
AA seq
DB search
MAESAGGIDRKADERMEFSTSKEVTVHPTFESMSLKENLLRGIYAYGYESPSAVQSRAIV
QVCKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALG
DYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEAD
ELLNKGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELTLEG
LKQYFIAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGD
MPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGR
FGRKGVAINFVTTEDVRILRDIELYYSTQIDEMPMNVADLIA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaagcgcaggaggaatcgatcgcaaggccgatgagaggatggagttttccacc
tccaaggaggttacggtccatcctactttcgagtccatgtcactgaaggagaacctcctt
cgcggcatctacgcttacggatacgagtctccttctgctgttcaatctcgtgccatcgtc
caggtctgcaagggccgtgacaccatcgcccaggctcaatccggtacaggaaagaccgct
accttttccatcagtatgctgcaggtcatcgacaccgcggtgcgcgagacacaggcccta
gttttgtcacccacacgagaattggcgactcagatccagtccgtcgtaatggcgctgggt
gactacatgaacgtccaatgccacgcttgtatcggaggtacaaacgttggtgaagatatc
cgcaagctcgactacggccagcacattgtctctggcactccagggcgtgtggcagacatg
attcgacgacgacacttgcgcactaggcatatcaagatgctggttctcgatgaagctgac
gagctcctcaacaagggattccgtgagcagatctacgatgtctaccggtacctccctcct
gccacacaagtcgtggtcgtcagtgccaccctgccttacgatgtcctcgacatgacgacc
aagttcatgaccgatcctgttcgcattctcgtcaagcgtgacgaattgaccctcgaaggt
ctcaagcagtacttcatcgccgtcgagaaggaggactggaagtttgataccctatgcgat
ctctacgacaccctcactatcacgcaagccgtcatcttctgcaacacacgccgcaaggtt
gactggctcaccgacaagatgcgcgaagccaactttaccgtcagcagcatgcacggcgat
atgccccaaaaggagcgagacagcattatgcaggacttccgtcagggcaacagtcgagtt
ctcatctcgaccgatgtgtgggcccgtggtatcgacgttcagcaggtcagtctggtaatc
aactatgacctgccaagtaaccgtgagaactacatccaccgcattggtcgtagtgggcga
ttcggtcgcaagggtgttgctatcaacttcgttactaccgaagacgtgcgcatcttgaga
gacattgaattgtactactctacccagattgatgagatgcccatgaacgttgccgacctt
atcgcttaa
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