Fusarium venenatum: FVRRES_10115
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Entry
FVRRES_10115 CDS
T09539
Name
(RefSeq) uncharacterized protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
fvn
Fusarium venenatum
Pathway
fvn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fvn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FVRRES_10115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fvn03041
]
FVRRES_10115
03009 Ribosome biogenesis [BR:
fvn03009
]
FVRRES_10115
Enzymes [BR:
fvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FVRRES_10115
Spliceosome [BR:
fvn03041
]
Complex A
U2 snRNP components
U2 related factors
FVRRES_10115
Complex B
FVRRES_10115
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
FVRRES_10115
Ribosome biogenesis [BR:
fvn03009
]
Eukaryotic type
90S particles
Helicases
FVRRES_10115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
HA2_N
SRP54
AAA_19
T2SSE
AAA
Flavi_DEAD
NB-ARC
Motif
Other DBs
NCBI-GeneID:
37261753
NCBI-ProteinID:
XP_025593752
LinkDB
All DBs
Position
III:5813466..5815860
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AA seq
768 aa
AA seq
DB search
MSDYMGGKRSSADADESTRKKAKKEGGDAEKYNPYLAHMHDNGDSNGYGEEPSPDSPLAG
MKRQQTTAKQASKAEDSESNPFTGRPHSQKYFQILQSRRDLPVHKQRQEFLNKYHSTQIL
VFVGETGSGKTTQIPQYVVYDELPHLTGKLIACTQPRRVAAMSVAQRVADEMDVTLGEEV
GYSIRFEDMTGPKTMLKYMTDGMLLREAMHDHEMSRYSCIILDEAHERTLATDILMALLK
QISMRRPDLKIIIMSATLDAQKFQKYFNDAPLLAVPGRTHPVEIFYTPEPERDYVEAAIR
TVLQIHASEPEGDILLFLTGEDEIEDACRKISLEADELMREVDAGPLAVYPLYGTLPPHQ
QQRIFDKAPAPLRKGGRPGRKVIISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVES
LLVSPISKASAQQRAGRAGRTKPGKCFRLYTEKAFKKELIEQTYPEILRSNLANTVLELK
KLGVEDLVHFDLMDPPAPETMMRALEELNYLACLDDDGELTTLGSMASAFPLDPALAVML
ISSPEFYCSNEILSITSLLSVPQIFTRPANNRKRADEMKAQFAHPDGDHLTLLNAYHAFK
GQATSDPNSAKQWCHEHFLSFRHLSSADNVRAQLKRIMETHGLELVSTPFEDKNYYTNIR
RALLAGFFMQVAMKESSGKLYRTVKDDQAVLIHPSTVLRTEFDWVLYNEFVLTSKQYIRT
CIGIRPEWLLEIAPTYYDIDSFEQGDVKRSLARAAEKKRRKEAMKAGR
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactatatgggaggaaagcgatcaagcgccgacgctgacgagtcaactcgaaag
aaggccaagaaagaaggcggcgatgctgaaaagtataacccttaccttgctcacatgcat
gacaacggggatagcaatggttatggcgaggagccttctcccgactctcctctagccggc
atgaagcgacagcaaaccaccgctaagcaggcctccaaagctgaggattcagagtcaaac
cccttcaccggccgaccgcattcgcagaagtacttccagatcctccagagccgtcgcgat
ttgcccgtgcacaagcaacggcaggagttcctcaacaagtaccactcgacgcagatcctc
gtcttcgtcggtgagacaggttccggaaagaccactcagatcccccaatatgttgtttac
gacgagctacctcacctcaccggcaagctcatcgcttgtacccagccgcgtcgagtcgcc
gccatgtcggtcgcgcagcgtgtcgctgatgagatggacgtcaccttgggtgaggaagtt
ggttacagcattcgttttgaggatatgacaggccccaagaccatgctcaaatacatgact
gacggtatgcttctgcgcgaggccatgcacgaccacgagatgtctcgctacagctgcatt
attctcgatgaggctcacgaacgtaccctcgcgaccgatattcttatggccctgctcaag
cagatctccatgcgccgccccgaccttaagatcattattatgtctgctactcttgacgct
caaaagttccaaaagtacttcaacgacgcgcccctgctcgctgtccctggtcgaacccac
cctgtcgagatcttctacacacccgagcctgagcgcgattacgtcgaggctgccataaga
actgttctccaaatccacgcttctgagcctgagggcgatattctgctcttcttgactggt
gaagacgagattgaggacgcttgtcgcaagatcagcctcgaggccgatgagttaatgcgc
gaggttgacgcaggtcctcttgctgtgtaccccctctatggtactctgcctccccatcag
cagcagcgcatcttcgataaggcccctgcacctctccgcaagggcggtcgccctggacgt
aaggtcatcatttccaccaacatcgccgaaaccagtttgaccattgacggtatcgtgtac
gtcgtggaccccggtttcagtaagcagaagatttacaaccctcgtatccgtgtcgagtct
cttttggtttcgcccatctccaaggcctctgcccaacagcgagctggtcgtgctggtcgt
acaaagcctggaaaatgtttccgtctttacacagagaaggcctttaagaaagaactgatc
gagcagacataccctgagattctgcgctccaaccttgccaacacagttttggagctcaaa
aagctcggtgtcgaggatcttgtccatttcgatcttatggaccctcctgctcctgagact
atgatgcgagctcttgaggagctcaactatctcgcctgtctcgacgatgatggtgagctg
accactctcggcagcatggcatcagcgttccctctggatcctgccctggctgtcatgctc
atctcttctcctgagttttactgctccaacgagattctttccatcacttctctactctcg
gtgccccaaatcttcactcgccctgccaacaaccgcaagcgcgctgatgagatgaaggcg
cagtttgctcaccctgatggagaccacctgaccctgctcaacgcctaccacgccttcaag
ggccaggctacatcggaccccaacagcgccaaacagtggtgtcacgagcatttcctctcg
ttccgacatctttccagtgctgacaacgtgcgcgcacaacttaagcgcatcatggaaaca
catggtctcgagcttgtctcaacgccatttgaggacaagaactattacaccaacatccgt
cgcgcgttacttgctggtttcttcatgcaggtcgctatgaaggagagctctggcaagctc
tatcgcactgtcaaggatgaccaggctgtcttgatccacccctcgacagttcttcgcacc
gagtttgactgggttctctacaacgaatttgtcctgacgtcaaagcaatacatccgtaca
tgtataggtatccgacctgaatggctactggagattgcccccacctactatgacatcgat
agctttgagcaaggcgacgtcaagcgctctcttgcccgtgctgcagagaagaagcgccgc
aaggaggccatgaaggctggtagatga
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