Fusarium venenatum: FVRRES_10152
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Entry
FVRRES_10152 CDS
T09539
Name
(RefSeq) uncharacterized protein
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
fvn
Fusarium venenatum
Pathway
fvn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FVRRES_10152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvn03019
]
FVRRES_10152
03036 Chromosome and associated proteins [BR:
fvn03036
]
FVRRES_10152
Enzymes [BR:
fvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FVRRES_10152
Messenger RNA biogenesis [BR:
fvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
FVRRES_10152
mRNA degradation factors
5'-3' decay
Decapping complex
FVRRES_10152
Chromosome and associated proteins [BR:
fvn03036
]
Eukaryotic type
Gene silencing
piRNA pathway
FVRRES_10152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NA-iREase2
CMS1
Motif
Other DBs
NCBI-GeneID:
37261790
NCBI-ProteinID:
XP_025593789
UniProt:
A0A2L2U4K4
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All DBs
Position
III:5928159..5929835
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AA seq
522 aa
AA seq
DB search
MADQLADKLKSTQLSDGSPGASDEWKKNLNLPAKDNRQQTEDVTNTKGLEFENFALKRDL
LMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKISKIQC
LILVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTGLRDDIIRLQDPVHIVVGTPGRILD
LAGKNVADLSECPMFIMDEADKLLSIEFTPVIEQLLQFHPKDRQVMLFSATFPLSVKDFS
DKNMVSPYEINLMDELTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVE
LLAKKITELGYSCFYSHAKMQQHARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVIN
FDFPKNAETYLHRIGRSGRYGHLGLAINLINWDDRFNLYNIERDLGTEIQPIPASIDKSL
YVYENPESIPRPISNLQRGQLPAAQGQQPPQQQQQYQQPQQMQQAGLPQQGQGNWQSQNP
QHGNPHYNNGGRGRGGRGRGYRGRGGQGTGGRGRGPPRDVQS
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcagctagcagacaagctgaaatccacccaactcagtgacggttctcccggc
gcgagtgacgagtggaaaaagaatctcaacctccccgccaaagacaaccgacaacaaaca
gaggatgttacaaacacaaagggcctggagttcgaaaacttcgcccttaagcgagacctg
ctcatgggtatttttgaagcaggattcgaaaagccatcaccgattcaagaggaatctatc
cccgtcgcattaactggccgagatatccttgcccgtgcaaagaacggcactggcaagaca
gctgcctttgtcatccccactttggaacgcatcaaccccaagatttctaagatccagtgt
cttattcttgtccccacacgtgagcttgccatgcagacctcgcaagtctgcaaaactctg
ggtaagcacctcggtatcaatgtcatggtcacgactggtggcactggccttcgagatgat
attattcgccttcaggatcctgtccatattgtggttggtaccccaggccgaattctcgat
ctcgctggcaagaatgttgccgaccttagcgaatgccccatgttcatcatggacgaagcc
gataagcttctatccattgagttcacccctgtcatcgagcagctcctgcaattccacccc
aaggaccgacaggtcatgcttttctccgccaccttcccgctgtccgtcaaggacttctcc
gataagaacatggtcagcccgtatgagattaacctaatggatgagctcacactgaggggt
attacccaatactacgctttcgtcgaagagaagcaaaaggtccattgcttgaacactctc
ttctccaagctccaaatcaaccaatccatcattttctgcaactccacgaaccgagtcgaa
cttttggcaaagaaaatcacagagcttggctattcttgtttctacagtcatgcaaagatg
cagcaacatgcacgaaaccgcgttttccacgatttccgtaacggtgtctgccgaaacctt
gtgtgttccgacttgctcacccgtggtattgacattcaggccgtcaacgttgtcatcaat
tttgatttccccaagaatgccgagacttacctccatcgtatcggtcgatccggtcgttac
ggccaccttggtctggctattaacctgatcaactgggacgaccgcttcaacctttacaac
attgagcgagacctcggcaccgaaatccagcctatccccgccagcatcgacaagagcctc
tatgtttacgagaaccccgagtcgatccctcgacccatttcaaacctccaaaggggccaa
ctacctgctgctcagggtcagcagcctcctcaacagcaacagcaataccagcagcctcag
cagatgcagcaggctggtctgcctcagcaaggccagggcaactggcagagccagaaccct
cagcacggcaatccgcactataacaatggcggacgaggccgtggtggacgtggacgtgga
tatcgtggccgcggtggccaaggcacaggcggtcgaggtcgcggcccgccccgcgatgtc
caatcctaa
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