KEGG   Fusarium venenatum: FVRRES_10233
Entry
FVRRES_10233      CDS       T09539                                 
Name
(RefSeq) uncharacterized protein
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
fvn  Fusarium venenatum
Pathway
fvn03022  Basal transcription factors
fvn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:fvn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    FVRRES_10233
  09124 Replication and repair
   03420 Nucleotide excision repair
    FVRRES_10233
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fvn03021]
    FVRRES_10233
   03400 DNA repair and recombination proteins [BR:fvn03400]
    FVRRES_10233
Transcription machinery [BR:fvn03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     FVRRES_10233
DNA repair and recombination proteins [BR:fvn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     FVRRES_10233
SSDB
Motif
Pfam: Tfb4 Rogdi_lz TackOD1
Other DBs
NCBI-GeneID: 37261871
NCBI-ProteinID: XP_025593870
UniProt: A0A2L2TYS5
LinkDB
Position
III:complement(6179834..6180901)
AA seq 355 aa
MDAVDVSEHYEVGTREDTPSLLSIVLDTNPRAWASLSSVLPLSRAIANILVFVNAHIAFS
NANQVALIAAHVDRAEWLYPTPPKPSRDASGDVEMNDASQTQTSANKFPQFAQIEAAVLS
AIRKLMDQTKETDLSATTTQISGALTLALCHINKAAQALCSPTANLEDSHKGSSNTSPPT
VRGRILVISVSDSEPSQYIPTMNAVFAAAHTQVVIDTLSLTGEPTFLEQACYNTGGTYLA
ATHPQGLLNYLMFGLIADTEAREALITPIHDTVDFRAACFCHGRVVDTGFVCSICLSIFC
ETPENSECFTCGTKLSLGNYGSKPAVVPRKKKKKRKVVNGGSREETGSATGTPRP
NT seq 1068 nt   +upstreamnt  +downstreamnt
atggacgccgtcgatgtttcggagcactacgaggtcggcacgcgcgaagacactccctcg
cttctctccatcgtcctcgacacgaaccctcgggcatgggcatcccttagcagcgtcctg
ccactgtcgcgcgccatcgcaaacatcctcgtctttgtcaacgcccatatcgcttttagt
aacgccaaccaagtagctttgatcgctgctcatgtcgaccgcgcagaatggctatatccg
acaccacccaagccctcacgcgacgcctcgggcgatgttgaaatgaacgacgcttctcaa
acgcaaacctccgcgaataagttcccccagtttgcgcagatcgaagccgcggttctgtct
gccatacgcaagcttatggaccagaccaaggaaacagacttgtctgctactacgacgcaa
atatctggggcattaacactggcgctatgccatatcaataaggctgcgcaggctctctgt
tcgcccacagccaaccttgaagacagccataaaggctcttccaatacatctcctccaact
gtccgcggccgaattctcgtcatatctgtgtccgattccgaaccgtcacaatacatcccc
accatgaatgctgtctttgcagctgcgcatacccaggtcgtcatcgacaccctctcactt
accggcgagccgacatttctcgaacaagcctgttacaatactggcggcacatatttagcg
gctacgcatcctcaaggcctactcaactacctcatgttcggtctcatagctgatacagaa
gctcgcgaagcccttattaccccgatacacgatactgtcgatttccgcgctgcttgtttc
tgccacggccgagttgttgacacgggatttgtttgctcgatctgcctcagcatcttttgt
gagacgccagagaactcggagtgtttcacatgcggaacaaagctgtcactgggcaactac
ggctctaagcctgctgttgttcctcgtaaaaagaagaagaagcgcaaggtagttaacggt
ggatcgcgagaagagacaggaagcgcaacagggacacctcgtccttga

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