Fusarium venenatum: FVRRES_11400
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Entry
FVRRES_11400 CDS
T09539
Name
(RefSeq) uncharacterized protein
KO
K15542
polyadenylation factor subunit 2
Organism
fvn
Fusarium venenatum
Pathway
fvn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fvn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
FVRRES_11400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvn03019
]
FVRRES_11400
Messenger RNA biogenesis [BR:
fvn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
FVRRES_11400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WDR55
WD40_Gbeta
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
PEP5_VPS11_N
Beta-prop_WDR75_2nd
eIF2A
Beta-prop_Vps41
Beta-prop_ACSF4
PROPPIN
Beta-prop_NUP159_NUP214
MIOS_WD40
Beta-prop_WDR11_2nd
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
37263036
NCBI-ProteinID:
XP_025581104
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Position
IIII:complement(<946351..>948568)
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AA seq
616 aa
AA seq
DB search
MAYEPRGDHGGGGGGAQGQDGAFVKVRGRRPVTDYGATITHWQHDRAPSYKGGYTGEAER
PSVSYIVDMLPPAARVTKAADSIPIKHLHSSLNKIKHPINVVRWTPEGRRLLTASTSGEF
TLWNGTGFNFETIMQAHDSAIRALEYSHSDDWLISADHDGAVKYWQPNFNNVQSINAHTD
PIRDLAFSPSDSKFVTASDDSTLKIFDFALGQMESKLEGHGWDAKSVDWHPTKGLLVSGS
KDHLVKLWDPRTSRCLTTLHGHKSTITKVLFEKVRGACLATSARDQTARVFDLRMMRDIC
LLKGHEKDISTLTWHPIHPNLLSTGGMDGSLFHYLLDSPNPPPGQSFTVAPYDSPDPTTV
PAQSVWPMHKVPYAHDYAIWSLDWHPLGHILASGSNDRITRFWSRARPGDAEVFQDRYHI
GEAAAEAQGTWDRRGGRRQRQEEEQQEMEDEMDALVDQDAPKAGVPGLPGLPGIPGLPLG
GLPGLGSIAPPPPIPGVGAGAPPPPLPFPLPGLNGGLPPPPLPGLDPNNPPDPAQLLELM
KKAGVPLPPPGALPPGLLPPGGIPPPPGGFAIPPPPPPMSALDAEKAENIRRRAPLPSQE
DSLRHEQRQGKYTRAR
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggcctatgagcctcgtggtgatcatggtggcggcggcggcggtgcgcaaggtcaagac
ggagcatttgtcaaagtcaggggacgacgacctgtgactgactatggtgctactatcaca
cattggcagcatgatcgtgcccctagctacaagggaggatatactggtgaagctgagagg
cccagcgtcagctacatagttgatatgctcccccctgcagctcgagtcaccaaagccgcc
gacagcattcccatcaaacaccttcactcttctcttaacaaaatcaaacaccctattaat
gtggttcgatggacgccagaaggtcgaagattattaacggcatcaaccagcggcgagttt
actctgtggaacggtactggctttaatttcgaaaccatcatgcaggctcacgattctgct
atccgagctctcgagtactcccacagtgatgattggcttatttcggctgatcatgatgga
gctgtcaagtactggcagccaaacttcaacaacgtccagagtatcaacgcgcacacagac
cccattcgagaccttgcattcagccctagtgactcgaaattcgttaccgccagtgatgac
tcaaccctcaagatcttcgactttgccttgggacagatggaatctaagcttgaggggcac
ggatgggatgccaagagtgtggattggcatcctaccaagggtttactagtgtctggttca
aaagatcatcttgtaaagctttgggatccgcgaaccagtcgctgtctaacaactctgcac
ggccacaagagtaccatcaccaaagtcctgtttgaaaaggtccgtggagcctgcctggca
acatctgcaagagaccagactgctcgcgtattcgaccttcgcatgatgcgagacatctgt
ttgctcaagggccacgagaaggatatctctactcttacatggcatcccattcatcctaat
cttctcagcactggcggcatggacggttcgctcttccactacctcctcgactctcccaac
ccaccccctggccaatcctttaccgttgcaccttatgatagtcccgacccaaccacagtg
cctgctcagtcagtgtggccgatgcacaaggtcccttatgcacacgactatgccatctgg
tcattggactggcatcctcttggtcacattctagcttcaggttcaaacgatcgtataact
cgtttctggagccgagctcgaccaggcgacgcagaagtcttccaggaccgctaccatatt
ggtgaagctgccgctgaagcccaaggaacatgggatcgccgcggtggtcgtcgccagcgt
caagaagaggagcagcaggaaatggaagacgagatggatgctctggtcgaccaagatgcc
ccgaaagccggcgttcctggcttgcctggcctgcctggtattcctggtcttccccttggt
ggactacctggcctgggatcaattgccccgcctcctcctattcctggtgtcggtgcaggt
gcccctccaccacctctgccattcccattacctggactcaacggcggtctaccgccacca
cctctgcccggtctggatcccaacaatcctccagacccagctcaacttcttgagctcatg
aaaaaggccggcgtgcctctgccaccacctggagctctgcccccaggtcttctaccacca
ggcggtatacccccaccacctgggggcttcgccatacccccaccacctcctcctatgtct
gctcttgatgctgagaaggcagagaatatcaggcgaagagcccctttacccagccaggaa
gacagtttgcggcatgaacaacggcaaggaaaatatacgagggcgaggtag
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