Fusarium venenatum: FVRRES_11561
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Entry
FVRRES_11561 CDS
T09539
Name
(RefSeq) uncharacterized protein
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
fvn
Fusarium venenatum
Pathway
fvn03018
RNA degradation
fvn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fvn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FVRRES_11561
09123 Folding, sorting and degradation
03018 RNA degradation
FVRRES_11561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvn03019
]
FVRRES_11561
03041 Spliceosome [BR:
fvn03041
]
FVRRES_11561
Messenger RNA biogenesis [BR:
fvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
FVRRES_11561
mRNA degradation factors
5'-3' decay
Lsm complex
FVRRES_11561
Spliceosome [BR:
fvn03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
FVRRES_11561
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
37263194
NCBI-ProteinID:
XP_025581262
LinkDB
All DBs
Position
IIII:complement(<1422974..>1423497)
Genome browser
AA seq
102 aa
AA seq
DB search
MASQLLPLELIDKCVGSRIWVIMKGDKGKTSVCCQERRCTDELAEFSGTLVGFDDYVNMV
LEDVTEFDYSGNHTKLPKILLNGNNICMLIPGGEGPEGAASG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcctcccaactgctacccctcgagcttatcgacaagtgtgttggctcgagaatttgg
gtcatcatgaagggcgataagggtaagacgagtgtttgctgtcaagagaggcgttgtact
gatgagctggcagaattcagtggaacactcgttggattcgatgactacgtcaacatggtt
ctggaggacgtgactgagtttgattactcgggaaaccacaccaagctacccaagattcta
ctcaacggtaacaacatttgcatgttgatccccggtggtgagggcccagaaggggctgct
tcaggttga
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