KEGG   Fusarium venenatum: FVRRES_11561
Entry
FVRRES_11561      CDS       T09539                                 
Name
(RefSeq) uncharacterized protein
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
fvn  Fusarium venenatum
Pathway
fvn03018  RNA degradation
fvn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fvn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FVRRES_11561
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FVRRES_11561
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fvn03019]
    FVRRES_11561
   03041 Spliceosome [BR:fvn03041]
    FVRRES_11561
Messenger RNA biogenesis [BR:fvn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     FVRRES_11561
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     FVRRES_11561
Spliceosome [BR:fvn03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    FVRRES_11561
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 37263194
NCBI-ProteinID: XP_025581262
LinkDB
Position
IIII:complement(<1422974..>1423497)
AA seq 102 aa
MASQLLPLELIDKCVGSRIWVIMKGDKGKTSVCCQERRCTDELAEFSGTLVGFDDYVNMV
LEDVTEFDYSGNHTKLPKILLNGNNICMLIPGGEGPEGAASG
NT seq 309 nt   +upstreamnt  +downstreamnt
atggcctcccaactgctacccctcgagcttatcgacaagtgtgttggctcgagaatttgg
gtcatcatgaagggcgataagggtaagacgagtgtttgctgtcaagagaggcgttgtact
gatgagctggcagaattcagtggaacactcgttggattcgatgactacgtcaacatggtt
ctggaggacgtgactgagtttgattactcgggaaaccacaccaagctacccaagattcta
ctcaacggtaacaacatttgcatgttgatccccggtggtgagggcccagaaggggctgct
tcaggttga

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