Fusarium venenatum: FVRRES_12041
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Entry
FVRRES_12041 CDS
T09539
Name
(RefSeq) uncharacterized protein
KO
K12830
splicing factor 3B subunit 3
Organism
fvn
Fusarium venenatum
Pathway
fvn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fvn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FVRRES_12041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fvn03021
]
FVRRES_12041
03041 Spliceosome [BR:
fvn03041
]
FVRRES_12041
03036 Chromosome and associated proteins [BR:
fvn03036
]
FVRRES_12041
Transcription machinery [BR:
fvn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
FVRRES_12041
Spliceosome [BR:
fvn03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
FVRRES_12041
Complex B
FVRRES_12041
Complex C
U2 SnRNP specific factors
FVRRES_12041
Chromosome and associated proteins [BR:
fvn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
FVRRES_12041
TFTC complex
FVRRES_12041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
37263674
NCBI-ProteinID:
XP_025581742
LinkDB
All DBs
Position
IIII:2953546..2957557
Genome browser
AA seq
1212 aa
AA seq
DB search
MATTSNMFLYSLTVQPPTNVTQAVLGQFAGTREQLIITGAGSQLSLLRPDPSQGKVITLL
SHDVFGIIRSLAAFRLAGSNKDYLIIASDSGRITVIEYLPTQNRFQRLHLETFGKSGVRR
VIPGEYLACDPKGRACLIASTEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVISMVALD
VGYSNPVFAALEIDYSEVDQDSTGQAMEELDTQLVYYELDLGLNHVVRKWSDPVDPTASI
LFQVPGGSDGPSGVLVCGEENITYRHSNQEAFRVAIPRRRGATEDPNRKRTIVSGIMHKL
KGNTGAFFFLLQTDDGDLFKLSIDMIEDEEGNPTGEVKRLKVKYFDTVPVASSLCILKSG
FLYVATQFGNYSFYQFEKLGDDDEELEFYSDDFPADPKASYEPVYFHPRPTENLALVESI
PAMNPLLDCKVANLTGEDAPQIYTICGNGPRSSFRMLKHGLEVNEIVASELPGIPSAVWT
LKLNRSEQYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTLAAQLLGDDGLIQVHP
KGIRHIRNGNVNEWAAPQHRSIVAATANAHQVAVALSSGEIVYFEMDADGSLAEYDEKKE
MFGTVTCLSLGDVPEGRLRSSFLAVGCDDCTVRILSLDPESTLENKSVQALTAAPTSLAI
IAMEDSSSGGSTLYLHIGLHSGVYLRTVLDEITGELTDTRQKFLGPKEVRLFQVTVQGKT
CVLGLSSRPWLGYADPITKGFVVTPLNYVDLEWGWNFSSEQCEEGIVGIQGQSLRIFNID
RLGETLIQKSIPLTYTPKKLVKHPDQPLFYTIEADNNTLPPELRAQLLADPGVVNGDSRV
LPPEDFGYPKGTRRWASCINVIDPLSEEGQVLQTINLENNEAAVSAAIVPFASQDNESFL
VVGTGKDMVVNPRSFSEGYLHIYRFLEGGRELEFIHKTKIEEPPLALLAFQGRVLVAVGT
SLRIYDLGMRQMLRKSQAEVATQQIVSLNTQGSRIIVGDVQQGVTYVVYKPASNKLIPFV
DDTIARWTTCTTMVDYESVAGGDKFGNMFIVRCPEKASEEADEEQSGLHLINARDYLHGT
PHRVSLMCHFYTQDIPTSITKTSLVVGGQEILLWSGIMGTIGVFIPFVSREDADFFQNLE
QHLRTEDPPLAGRDHLMYRGYYAPVKGVIDGDLCERYNLLPNDKKQMIAGELDRSVREIE
RKISDIRTRSAF
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacatcgaacatgtttttatattcgcttacggtccagcctcctacaaatgtc
acgcaggcggtcctgggccagttcgcaggcactcgggaacagctcatcatcactggtgct
ggctcacagctctcactgctacgacctgatccctcccagggaaaggtgattaccctcctc
tctcatgacgtctttggcatcatccgttcccttgccgccttccggttagctggtagtaat
aaggattacttgattattgcttctgactctggtcggatcacagttattgagtatctccca
actcagaaccgcttccagcgactacaccttgaaacatttggaaagtcaggcgtgagaaga
gtgattcctggcgagtatcttgcttgcgatcctaagggcagagcgtgcttaattgcctca
acggagaagaacaagcttgtttatgtcctaaatcggaattcacaagctgagcttacgatc
tcgtcgcctcttgaggctcacaagccaggtgttcttgtcatctccatggttgcacttgac
gtcggctactcgaatcctgttttcgccgcgctcgagattgactactcagaggttgatcaa
gattcaacaggccaagctatggaagaactggatactcagcttgtctactacgagcttgat
ctaggactcaaccacgtcgtccggaagtggtcggatccagtcgatcctacagcctcaatc
ctattccaggttccaggtggcagcgatggtccaagcggtgtgttggtatgcggtgaagaa
aacatcacatatcgacactcaaatcaagaggccttccgcgttgccatccctcgtcgccgc
ggtgctacagaagatcccaatcgcaagcgcacaattgtgtctggcattatgcacaagctg
aaaggcaatacgggtgcattctttttcttgttgcaaacggacgatggtgatctcttcaag
ctctccatcgacatgattgaagatgaagaaggcaatccaacaggagaagtcaagaggctc
aaggtcaagtacttcgacaccgttccagtggcatccagtctttgtatcctcaagagtgga
ttcctctatgttgccacacagtttggcaactactcattctaccaatttgaaaaacttggt
gacgatgatgaggaactggaattttacagcgacgattttcccgcagaccccaaagcctcc
tatgaacctgtgtacttccacccccggccaactgaaaacttggctttggttgagagcatt
cctgccatgaaccccctgttagactgcaaggttgcaaatctcactggcgaagacgcccct
caaatatataccatctgtggcaatggcccccgaagcagcttcagaatgctcaagcatggc
ttggaagtcaatgagatcgttgcttctgaacttcctggaataccttccgctgtatggaca
ctgaagctgaaccgctcggaacaatacgatgcttacattgtgttgtcgtttaccaatggt
acattggttttgagtattggagaaacggtcgaggaagtcagcgactcaggattcctcacg
agcgttccaacattggcagctcagctgctcggtgacgatggcctgattcaagttcatcct
aaaggcattcgtcatatccgtaatggaaacgttaatgaatgggcagccccacaacatcga
tccattgttgccgctaccgccaatgctcatcaagttgctgtcgccctcagttctggcgag
attgtatacttcgaaatggacgccgacggttcgttggccgagtacgacgagaagaaggaa
atgttcggaacagtcacatgcctgagcttgggagatgtccctgaagggcgcctgagaagc
tcattcctggcagtcggctgtgatgactgcactgtccgtattctcagccttgatcctgaa
tcgactttggaaaataagtcggtgcaggctctgacagcggcccctacgtcgttagctatt
attgccatggaagactcttcatccggtggctctacactctatcttcacatcggactccac
tccggtgtgtatcttagaacagttctcgacgagatcaccggtgaattgactgatacccgc
caaaagttccttgggccgaaggaagtcagactgttccaagttactgtccagggtaagact
tgtgtacttgggcttagttctagaccttggcttggctatgcggatcccatcaccaaggga
tttgttgtgacgcccctaaattacgttgatctcgagtggggctggaacttcagcagtgag
caatgcgaagaaggcattgttggcattcaaggccagtcactacgaatcttcaacattgat
cgtcttggcgagacattgatccaaaaatctattcctttaacttatacccccaagaagctc
gtcaagcatcctgatcaacctcttttctacactatcgaagcagacaacaacacgttgcca
cctgagttaagagcacaactcctcgccgaccctggagtcgtaaatggcgactctagggtg
cttccgcctgaagactttggctaccccaaaggtactcggagatgggcatcttgcatcaac
gtaattgaccccttgtctgaagaaggccaggttttgcagacaataaatttggagaacaac
gaggcagccgtcagtgcagctattgtgccatttgccagccaggataacgagagcttcctc
gtcgttggtaccggtaaagatatggtggtcaatcctcgaagcttttcggaaggatacctc
catatctaccgtttcttggaagggggtcgggagcttgagtttatccacaagaccaagatt
gaagaaccgccactggccttactggcattccaaggaagagtgcttgtagctgttggcaca
tcgcttcgcatatatgacttgggtatgaggcaaatgctccgcaagtctcaggccgaagtt
gcaacacagcagattgtgtctctcaacacacaaggcagtcgaatcattgtaggcgatgtt
cagcagggcgtcacttacgttgtttataagcctgcttctaataagcttattccatttgtc
gatgatacaatcgcaaggtggaccacatgtacaaccatggtggattatgaatcagtcgct
ggtggtgacaagttcggtaatatgtttatcgtacgttgtcctgagaaggccagtgaagag
gctgatgaggagcaatccggcttgcatctgatcaatgcccgagactatctccacggcaca
cctcacagagtgagcttaatgtgtcatttctacacccaggacattccgactagtatcact
aagacgagtcttgtggttggtggacaggaaattttgctatggagtggtatcatgggcaca
atcggagtttttattccatttgtcagtcgtgaagatgcagacttttttcagaacctcgag
caacaccttaggacagaagatcccccactcgccggacgagatcatctcatgtatcgtggc
tattatgcccctgtcaagggagtcatcgacggtgacttgtgcgaacggtacaaccttcta
ccaaacgataagaagcagatgatcgcaggcgagttggaccgctcagtccgggagattgag
aggaagatttctgacatccgtacacggtctgcattttaa
DBGET
integrated database retrieval system