Fusarium venenatum: FVRRES_12129
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Entry
FVRRES_12129 CDS
T09539
Name
(RefSeq) uncharacterized protein
KO
K07573
exosome complex component CSL4
Organism
fvn
Fusarium venenatum
Pathway
fvn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FVRRES_12129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvn03019
]
FVRRES_12129
Messenger RNA biogenesis [BR:
fvn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
FVRRES_12129
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
FVRRES_12129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
PCB_OB
Motif
Other DBs
NCBI-GeneID:
37263761
NCBI-ProteinID:
XP_025581829
UniProt:
A0A2L2T671
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Position
IIII:complement(3193621..3194298)
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AA seq
208 aa
AA seq
DB search
MAVDDIPSVALPGKVLGPVTKFAPGAGTHVYEGNVVSSLLGQVTVTPAAKGPGPQKRLNK
ITAPTSEELATVSVSRHGRKREILPDVDNIVLARVLRLMPKQAIVVIQQVGDTVLQTEWQ
GVIRVQDVRATEKDKVKIYESFKPGDIVRAQVISLGDQANYYLSTASNELGVILATSEAG
NDMVPISWKEYKDPETGISEPRKVAKPS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcgacgatatcccctccgttgccttgcctggcaaggtcttgggcccggttacc
aagtttgcgcccggcgccggtacacacgtttacgaaggaaatgttgtctcttctctacta
ggccaagtcactgtgacgcctgcggccaagggcccaggacctcagaagcgcctgaacaag
atcaccgcccctacgtcagaagagcttgccaccgtctctgtatcccgccatggtcgtaag
cgcgagattctccccgatgtcgataacattgtccttgcgcgtgtactccgccttatgccc
aagcaggccattgtggtgatccagcaagtgggcgacactgttctccaaaccgaatggcag
ggtgtgattcgagtgcaggatgtgagggcaacagagaaggacaaggtcaagatttacgaa
tctttcaaacctggtgatattgtacgagcgcaagtgatctctcttggtgaccaggccaac
tactacctctcaacggcatccaacgaattgggtgttatcctggccacgagcgaggcgggc
aacgacatggtccctatcagctggaaagaatacaaagaccccgaaacaggcatcagtgag
cctcgaaaagtcgcaaagcctagctga
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