Fusarium venenatum: FVRRES_13230
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Entry
FVRRES_13230 CDS
T09539
Name
(RefSeq) uncharacterized protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
fvn
Fusarium venenatum
Pathway
fvn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fvn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FVRRES_13230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fvn03041
]
FVRRES_13230
03009 Ribosome biogenesis [BR:
fvn03009
]
FVRRES_13230
Enzymes [BR:
fvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FVRRES_13230
Spliceosome [BR:
fvn03041
]
Complex A
U2 snRNP components
U2 related factors
FVRRES_13230
Complex B
FVRRES_13230
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
FVRRES_13230
Ribosome biogenesis [BR:
fvn03009
]
Eukaryotic type
90S particles
Helicases
FVRRES_13230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
OB_NTP_bind
HA2_C
Motif
Other DBs
NCBI-GeneID:
37264860
NCBI-ProteinID:
XP_025582928
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All DBs
Position
IIII:6218826..6221124
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AA seq
600 aa
AA seq
DB search
MDFINSNQTTAEQARILEDAEDHPLKPGVKHSANYFQLLAERRRLPVSAAHQEFLDVYHR
NKFVVFDEAKRGLVACTQPRRLVAKDAATRVAAEIDITLGEEVGYSVHFDEKPSDNSILR
YMTDGRLLQEAQRDQTFQAYSCVIINEAHKQTLPTDILIGLLKKAIQVRDNLKVVIISAT
MNVERFVKYFGQAEAFNVSSKAYPVKIHWLEEPTVDWRCLTLNFVKNICNNMPVLGNKLV
ALHLYYGLNAAEQRRAIFSSTDPLRKCIVSTNIAETSLTIDRIVYVIDTGIEKKSGYNAR
ADMDTLITATVTQASAKQQAGRAGRTKPGTCIRLYTEKTFLEDFAPYAWPGIKTSPVTTE
VLRLMSMDINVVDFDFITLPPMENFLRALYELKAMDLITDHGVINGRGRNAAKFPMDPQW
WNAISEGQNLGCGVDIIAITAIASTQNSMFLRPWNVRTAADASRARFACPDSDHVAQLNA
LHGYVRTKHTAKDMDLDQWCSDAFIDRKVMEEALQIRQQLINIAEEIFDQLLTSGTGDDD
LLAIESCLVGQKYKLVVFNAITHVGKTFLETSSAVEAEWLVDLPFFKDDQLSRKLDGDLR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggacttcatcaatagtaatcagactaccgctgaacaggccagaatcctcgaagatgcc
gaagaccatcctctcaagcctggagtaaaacactccgcgaactatttccaactcctggct
gagcgcagaagattgcctgtgtccgctgcccaccaggaattcctagacgtctaccacaga
aacaagtttgtcgtttttgacgaggccaagagaggtctggtggcttgcacgcagccccgt
cgtcttgtagcaaaagatgcagcaactcgagttgccgcagagatagacatcacgctaggc
gaggaggttggctacagcgtgcacttcgatgagaaaccgagcgacaatagcatcctcagg
tacatgaccgatggacggctgctgcaagaggcacagcgagaccaaactttccaggcctat
tcttgcgtaatcatcaacgaagcccataagcaaacactgccgactgacattctcataggt
cttctcaagaaagccatacaagtacgtgataacctcaaagtcgtcatcatatctgccacc
atgaatgtggaaagattcgttaagtatttcggccaggcagaggctttcaacgtcagcagc
aaggcctacccggttaagatccactggctcgaagaaccgactgtagactggcgttgcctt
actctaaactttgtaaagaatatctgcaacaacatgcctgtgctcggaaacaagctggta
gcgctgcatttgtattatgggctcaacgccgccgagcagcggagagctatattttcttca
accgacccccttcgcaaatgtatcgtatcaaccaatattgctgaaaccagtctaaccatt
gataggattgtctatgtcattgatactggtattgaaaagaagtcgggatacaatgctcga
gcagatatggacactctcattactgccactgtgacccaagcgtctgccaagcagcaagct
ggtcgagccggtcgaacaaagccggggacatgcatccgtctgtatactgagaagacattc
ttggaggacttcgctccctatgcatggccaggaataaagacttccccggttaccacggaa
gtcttgagactgatgtccatggacatcaacgtcgtcgatttcgacttcatcacccttcct
cccatggaaaactttcttcgggctttatacgagctcaaggcaatggacctcattacagac
catggcgtaatcaacggccgcggtcgcaatgccgctaaattccccatggaccctcagtgg
tggaatgctatctcggaagggcagaacctcgggtgcggtgttgacattatcgcgattacc
gccatcgcaagcactcaaaactcgatgttcctgcgtccctggaatgtcagaactgctgct
gatgcgtcaagagcccgattcgcctgtccagattcggatcacgttgctcaactgaatgct
ctgcatggctatgtccgcaccaagcacaccgccaaagacatggacctagatcaatggtgc
tccgatgccttcattgaccgaaaggtgatggaggaagcccttcagattcgacaacagctg
atcaacatcgccgaggaaatctttgatcagctccttacgtccggaacaggcgacgatgac
cttctcgccattgaaagctgcctggtcggccagaagtataaattggttgtgttcaacgcc
attactcacgtcggaaaaacgttcctggaaacttcatcagcggttgaggcagagtggctt
gtcgatcttcctttcttcaaagatgaccaactctcacgcaagcttgacggcgatctgcga
taa
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