Fusarium verticillioides: FVEG_00477
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Entry
FVEG_00477 CDS
T04869
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
fvr
Fusarium verticillioides
Pathway
fvr03440
Homologous recombination
fvr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
fvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FVEG_00477
03450 Non-homologous end-joining
FVEG_00477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fvr03032
]
FVEG_00477
03400 DNA repair and recombination proteins [BR:
fvr03400
]
FVEG_00477
DNA replication proteins [BR:
fvr03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
FVEG_00477
DNA repair and recombination proteins [BR:
fvr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
FVEG_00477
BRCA1-C complex
FVEG_00477
NHEJ (non-homologous end-joining)
MRX complex
FVEG_00477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
AAA_21
SbcC_Walker_B
AAA_13
GAS
AAA_29
AAA_22
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
30058843
NCBI-ProteinID:
XP_018742634
UniProt:
W7LA21
LinkDB
All DBs
Position
1:4889856..4894167
Genome browser
AA seq
1307 aa
AA seq
DB search
MSRIDKLSISGVRSFSPSIREAIQFNTPLTLIVGYNGSGKTTIIECLKYATTGELPPNSK
GGAFIHDPKLCGEKEVMAQIKLQFRSINDRQHVATRSLQLTVKKTTRSQKTLDCSLVVVN
NGERTTTSTRQAQLDEMIPERLGVSPAILDAVIFCHQDESLWPLSEPAALKKRFDEIFEA
MKYTKAIDNLKVIRKKQVEQLGKLQNDEAHNKVNKDRGDRAEKRMKALQAEIEGSRATCE
SISSEMEETQDKIRNSRETANSHLAIVQNLNTKREQLEYREEAVKELKATIDELPDEDGK
LEGDLAHYEDRMQHLQDEADQNKAQYNDLQTELGKSRKELSAKLSEQGKHQSDKDKYERQ
LKIRMETIQEAAQSYGFSGFEGDLSDHHVKSFNDKLQKLLSEKKRDLERLQKENSTELDR
ATGVITELEGRKAARTQDRVSAKQRMGAIEKRISVLQNESSQIDVDEGAKAVLDGQMQDL
ESRFQTAQKIFENADWDRQISDENDKLHQLENENDKLGRELVECTRLASERAQLDYRKKE
LADRKRKLDTLTTTWKPKLDKVIGRDWRPETLDSKFQALTKDQSKVVSEAQKRREQIRQK
QQKVEFKLRTSKESHEKKSREAATCQQQVVDALLAVRDNATVEDYKEEIDATESQVEELR
NELSLFDALVDYYTKCKRLLDTKRKCQLCDRHFDDNQAASMERLSKRIDKHLDPRGKLDT
EKDLKDTAASLEKLRSVRGSYDTYERLTAELPSLREECKVAEAEFDALERQVEEQGSVLS
AEEEKLKDLEDMSKTVLSIAQTVKDIAESENQVDRIMSQQMSGGITRSPDEIHELQAGLS
DQMKNLKNRIAKLTADRQRTKDQLNSLELEKSELRNKISRAVGQLDKKQDLQNQIQALKE
EASHQRDVIQRADEELETIEPSITEARSARDEVLRRGRAKEQVIADARDAVANSVNEMKM
MDADIQDYIDRGGPSNLASNERSIATLEKTIASTEKEVTDLTVRTNKLKQDIDNGDRKKK
NIKDNLNYRKNLRTIDVIRQEIAELEDRNADEDYERLQAEARMQENHYNRLLAERGSVMG
SMKTKDEELGRLLQEWEMDYKDAKRKYRESHIRVETTKAAIEDLAQCSSAVDKAVMQFHS
MKMAEVNRIAGELWQSTYQGTDIDTILIRSDNESNTGKRSYNYRLCMVKQDTEMDMRGRC
SAGQKVLASIIIRLALAESFGVNCGLIALDEPTTNLDRDNIKSLAESLHMIIKARQAQSN
FQLIVITHDEDFLRHMRCSDFCDSFFRVKRDERQNSVISRESITKIF
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaatcgacaagctttcgatctcgggtgtgcgatccttcagcccctcaatccgt
gaagctatccagttcaacacgccccttactcttattgtcggctacaatggatcaggaaag
acaacaatcattgagtgtctaaaatatgccacgaccggcgagctaccgcccaacagcaag
ggcggcgctttcattcatgacccgaagctttgtggtgagaaagaggttatggctcagatc
aaactccaatttcgatcgatcaatgaccgtcaacatgtcgctactcgaagtttacaactt
accgtcaagaagaccacccgctctcagaaaaccctggactgctccctggttgtagtcaat
aatggagagcgaacaacaacttctacgcggcaagctcagctagatgaaatgatcccggag
cgcctcggtgtttctcctgcaatccttgatgctgtcattttctgccatcaagacgaatcc
ctctggccattgagtgagccggctgctttgaagaaacggtttgacgagatatttgaggcc
atgaaatatacgaaagccatcgacaacctcaaggtcatccgaaagaaacaagtcgagcag
ctcggcaaacttcagaatgacgaggctcataacaaggtgaacaaggatcgtggtgacagg
gccgagaagaggatgaaagctctgcaagccgaaattgagggatctcgagcaacttgtgaa
tcgatcagttctgaaatggaggaaacgcaagacaagatccgaaacagccgagaaacggcg
aatagtcaccttgcaattgtgcaaaacctcaacaccaagcgtgagcagcttgagtacaga
gaagaggctgtcaaagaattgaaggccactatcgatgaactgcccgatgaggacggaaag
ctcgagggtgacctagcacattatgaagaccgtatgcagcatcttcaggatgaggccgac
cagaacaaagcacagtataatgatttgcagaccgagttaggaaaatcacgaaaggagctt
tctgccaagctttccgaacagggcaaacaccaatcggacaaagacaagtacgagcgtcaa
ttgaagatacgcatggaaaccattcaggaggccgcacagtcttatggcttctcgggcttt
gaaggcgatctttcagatcaccatgtgaaatccttcaatgacaaacttcaaaagcttctg
agcgagaaaaaacgggacctggagcgtttgcagaaggaaaactccactgagcttgaccgc
gccactggcgtcatcactgagcttgaaggccgtaaagctgctcgcacacaagaccgcgta
tccgcgaaacaacgaatgggcgctattgaaaaacgcatttcggtgctccagaacgagtca
agtcagatagacgtggacgagggtgccaaggctgtgcttgatgggcagatgcaagatctg
gaaagcagatttcagacagcccaaaagatcttcgagaacgctgattgggaccgccaaatc
tctgacgagaacgataagctacatcagctcgagaatgagaacgataagctaggccgggag
cttgtagaatgtactcgtctagcgtctgagcgagcccaacttgattacaggaagaaggaa
cttgctgaccgcaagcgcaagcttgataccttgacaaccacctggaagccgaagctcgac
aaagttattggcagggactggcggccagaaacactcgattccaagttccaggcattgact
aaggaccaaagcaaggttgtcagtgaggcccagaagcgtcgtgaacaaatccgccaaaag
cagcagaaagtggaattcaaattgagaacttctaaggagtcccatgagaagaaatccagg
gaggcggctacttgccaacagcaggttgtcgatgctcttcttgctgttcgcgacaatgct
accgttgaggattacaaagaagagatcgacgccactgagtcacaggttgaggagctcagg
aatgagttgagcctcttcgacgctctcgtggactattacacaaaatgcaagcgcttgctt
gataccaaacgcaagtgccaactctgtgatcgccactttgatgacaaccaagctgcaagt
atggaacgcttgagcaagaggatcgacaagcaccttgacccaagaggcaaacttgataca
gagaaagacctcaaagacaccgctgcaagcttagaaaagctacgatccgtcaggggatct
tatgatacgtatgagcggttgactgccgaactgcctagtcttcgggaagagtgcaaggtt
gccgaagcagagtttgatgcccttgagagacaagtagaagaacaaggatccgtcttgtcg
gctgaggaagagaagctgaaagacctggaagatatgtcaaagacggtcctcagcattgca
caaactgtcaaggatattgcagagtccgagaaccaggttgaccgtatcatgtctcagcaa
atgtctggtgggattactcgaagccccgacgagattcatgagcttcaagctggcctgtcg
gaccagatgaagaacctgaaaaatcgcatcgcgaagttgactgcggatcgccagcgcaca
aaagaccagctcaattctcttgagcttgaaaagagcgagttaagaaacaaaattagccga
gcagtgggtcaattagacaaaaagcaagacctccagaatcagatccaggcactgaaagaa
gaggcttcgcatcaacgagacgtcattcaacgagctgatgaggagttggagactattgag
cccagcattactgaagcaaggtctgcccgtgatgaagtcctaagacgcggccgggctaag
gagcaagtcattgctgacgcccgtgatgccgtagctaactctgtcaacgagatgaaaatg
atggatgccgatattcaagattatatcgaccggggcggaccttctaatcttgcatctaat
gaacgatccattgccacacttgagaagacaattgcgagtactgaaaaggaggtcacagac
cttactgttcgtacgaacaagctcaagcaggacattgacaatggagaccgtaagaagaaa
aacatcaaagacaacctgaactaccgcaagaatcttcgcacgatcgacgttatccgtcaa
gagatcgctgagttggaagaccgcaatgcagatgaggattacgagcgcctccaggctgaa
gctcgcatgcaagagaaccactacaatcgccttcttgctgagcgaggctccgttatggga
tctatgaaaaccaaagatgaagaacttgggaggctcctgcaagagtgggaaatggactat
aaggacgccaagagaaagtatcgcgagtcgcacattcgcgtggaaacgaccaaggctgct
attgaagatttggcgcagtgtagctcggccgtggacaaagctgtgatgcaatttcactcc
atgaagatggccgaagtgaatcgcattgctggtgaattgtggcagagcacctaccaagga
acagacattgatactattctcatccgctcagacaatgagtcaaacacaggcaagcgcagc
tacaactaccgactctgcatggtgaagcaggacactgagatggacatgcgtggcagatgt
tccgctggacaaaaggttctcgcgtctatcatcattcgcctagctctggcagagtctttt
ggcgtcaactgtggcctgatcgcactcgatgagcccaccacgaacttggatcgtgacaat
atcaagagtctggcggagagtctccatatgatcatcaaggcccggcaggcgcagagcaat
ttccagcttattgtgattactcatgacgaggactttttgcgacatatgaggtgtagcgat
ttctgtgacagtttcttcagagtcaagcgagatgaacgacaaaacagtgtcatctcgagg
gaaagcatcacaaagatcttctaa
DBGET
integrated database retrieval system
