Fusarium verticillioides: FVEG_00917
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Entry
FVEG_00917 CDS
T04869
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
fvr
Fusarium verticillioides
Pathway
fvr03018
RNA degradation
fvr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fvr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FVEG_00917
09123 Folding, sorting and degradation
03018 RNA degradation
FVEG_00917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvr03019
]
FVEG_00917
03041 Spliceosome [BR:
fvr03041
]
FVEG_00917
Messenger RNA biogenesis [BR:
fvr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
FVEG_00917
mRNA degradation factors
5'-3' decay
Lsm complex
FVEG_00917
Spliceosome [BR:
fvr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
FVEG_00917
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
Hfq
Motif
Other DBs
NCBI-GeneID:
30059251
NCBI-ProteinID:
XP_018743402
UniProt:
W7LF43
LinkDB
All DBs
Position
1:3486835..3488812
Genome browser
AA seq
83 aa
AA seq
DB search
MENGAISQGEGKDPSSFLSDIIGNPVTVKLNSGVVYKGELQSVDGYMNIALEKTAEYVNG
QKRREYGDAFVRGNNVMYISADS
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atggagaacggcgctatctcccagggtgagggaaaagacccttcaagcttcctcagtgac
attatcggcaatcctgttactgtcaagctcaactctggcgttgtttacaagggcgaactt
caatctgtggatggctacatgaacattgccctggaaaagacagccgagtatgtcaatgga
cagaagcgtagggaatacggcgacgcctttgtgagaggaaacaatgtcatgtatatctcg
gcagactcatga
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