KEGG   Fusarium verticillioides: FVEG_00925
Entry
FVEG_00925        CDS       T04869                                 
Name
(RefSeq) hypothetical protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
fvr  Fusarium verticillioides
Pathway
fvr03018  RNA degradation
fvr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fvr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FVEG_00925
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FVEG_00925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fvr03019]
    FVEG_00925
   03041 Spliceosome [BR:fvr03041]
    FVEG_00925
Messenger RNA biogenesis [BR:fvr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     FVEG_00925
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     FVEG_00925
Spliceosome [BR:fvr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    FVEG_00925
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 30059259
NCBI-ProteinID: XP_018743416
UniProt: W7LP16
LinkDB
Position
1:3465858..3466277
AA seq 99 aa
MATLGGYLNKKVLIVTADSRILVGTLAACDQTTNLVLNNAVERIIRTPDDPEPSAQVPLG
LYLVRGDNVCSIGLVDEALDDSINWTEVKGSAIGGIKHV
NT seq 300 nt   +upstreamnt  +downstreamnt
atggctacactcggtggatatctcaacaagaaagtcctgatcgttacagccgattcgcgt
attcttgtcggaactctggcagcatgcgaccaaacaactaatctggtcttgaacaacgct
gtagaacgaattatccgaacgcccgacgatcctgagccttccgctcaagtgcctttaggt
ctatacctcgtccgtggcgacaatgtatgctcaatcggcctcgtagatgaggcgcttgac
gacagcatcaactggacggaagtcaagggttcagcaatcggcggtataaagcacgtatag

DBGET integrated database retrieval system