KEGG   Fusarium verticillioides: FVEG_01422
Entry
FVEG_01422        CDS       T04869                                 
Name
(RefSeq) hypothetical protein
  KO
K12880  THO complex subunit 3
Organism
fvr  Fusarium verticillioides
Pathway
fvr03013  Nucleocytoplasmic transport
fvr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fvr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FVEG_01422
  09122 Translation
   03013 Nucleocytoplasmic transport
    FVEG_01422
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fvr03019]
    FVEG_01422
   03041 Spliceosome [BR:fvr03041]
    FVEG_01422
Messenger RNA biogenesis [BR:fvr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     FVEG_01422
Spliceosome [BR:fvr03041]
 Complex C
  Other components
   EJC/TREX
    FVEG_01422
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    FVEG_01422
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR3_2nd WDR55 WD40_Gbeta Beta-prop_TEP1_2nd ANAPC4_WD40 EIF3I Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_1st Beta-prop_SCAP Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_NOL10_N Beta-prop_ACSF4 Beta-prop_NUP159_NUP214 Beta-prop_WDR41 WD40_RFWD3 Ras
Other DBs
NCBI-GeneID: 30059721
NCBI-ProteinID: XP_018744277
UniProt: W7LHU1
LinkDB
Position
1:complement(1900212..1902330)
AA seq 336 aa
MAPVLRARQSLSKDKFSGYFGNLRSQPYNDPNNSRGSNPHSLRCIAWNPLGTLVATGSSE
KTLRVWNPEKPHVKFSTELKGHSASVEKVAFNPTKDAELCSVSSDGVVKFWDVRTKACFN
EVKGLGDAFTLVWAPDGNTLLVGNKADTIFVLSPSQSTPLSTHQQSVQTNQIAFCWSGEK
IFVTTAEGRIRVLSYPGFQPVLQSKHGEETDEFELNGHTSSCLTADLQPTGRYLATGGSD
SIIALWDTTYWICQRTITRMVGPVKSLSFTFDGSFVVGGSDEGSGLEVSHVETGDHVHTF
KTAGACPVVAWAPTRYCLAYSDLGILRIVGVDVDRK
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggcacctgtccttcgagcaagacaaagcttatcaaaggataagttctctggctacttt
ggcaacctcagaagccagccctacaacgaccccaacaactcgcggggctcgaatccccat
agcttgcgatgcatcgcgtggaatcctctcggaactctagtagcaacagggtcgtcagag
aaaaccctcagagtgtggaaccctgaaaagcctcatgtgaagttttctacggagctcaag
ggccactcagcatctgttgagaaggtcgcattcaacccaacaaaggatgcagagctttgc
agtgtgagcagtgacggcgtggtcaagttctgggacgtgaggacaaaggcatgcttcaac
gaggtcaaaggacttggggacgcttttactcttgtctgggcaccagatgggaacacgctt
ctcgttgggaacaaggcagataccatcttcgttctatcgccatctcagtcgacgcctctc
agcacgcatcaacagtccgtgcagaccaaccagatcgcattctgttggagcggtgagaag
atcttcgtgacgacagcagaaggacgtatccgagtcttgtcataccctgggttccaacct
gtattgcagagcaaacatggtgaagagacggacgagtttgagctcaatgggcatacttct
tcgtgtctgactgctgatctacagcctacggggcggtatctggcgacgggaggctcagac
tcgattattgcattgtgggatacaacatactggatttgccagcgaacaattacgaggatg
gtcgggccagtgaagagcctcagctttacgttcgatggtagttttgttgttggtggaagt
gatgaaggatccggcctggaagtatcacatgtcgagacgggagaccatgtccacacgttc
aagacagctggtgcttgtccagtagttgcttgggctccaacaaggtattgtcttgcatat
agtgatttgggcattttgcggatcgtgggtgtcgatgtcgacaggaaataa

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