Fusarium verticillioides: FVEG_02536
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Entry
FVEG_02536 CDS
T04869
Name
(RefSeq) small nuclear ribonucleoprotein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
fvr
Fusarium verticillioides
Pathway
fvr03018
RNA degradation
fvr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fvr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FVEG_02536
09123 Folding, sorting and degradation
03018 RNA degradation
FVEG_02536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvr03019
]
FVEG_02536
03041 Spliceosome [BR:
fvr03041
]
FVEG_02536
Messenger RNA biogenesis [BR:
fvr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
FVEG_02536
mRNA degradation factors
5'-3' decay
Lsm complex
FVEG_02536
Spliceosome [BR:
fvr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
FVEG_02536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
FoP_duplication
DUF150_C
Motif
Other DBs
NCBI-GeneID:
30060736
NCBI-ProteinID:
XP_018746091
UniProt:
W7LWQ5
LinkDB
All DBs
Position
6:780026..781111
Genome browser
AA seq
133 aa
AA seq
DB search
MSDRPSHRGGRGGQGSHSRGGRGGGRGGGGAGGAQQERERPKKENILDLGKYMDKQITVK
FNGGREVKGTLKGYDALMNLVLDDVHEVVRDDEGNDSTRSLGLVVVRGTLLVLVSPVDGS
EEIANPFVQAEDD
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatagaccctcacaccgaggcggccgcggtggccaaggatcgcattcacgaggt
gggcgcggaggcggtcgtggaggaggcggcgcgggaggcgcccagcaggagcgcgagaga
cccaagaaggagaacattcttgacttgggcaagtacatggacaagcagatcaccgtcaag
tttaacggcggtcgtgaggtcaagggcacattgaagggctatgatgctcttatgaaccta
gtactagatgatgtacacgaggttgttcgagacgacgaaggcaacgactccactcgatcc
cttggcctcgtagttgttcgaggtactctccttgttctcgtcagccctgttgacggcagt
gaagagattgccaacccttttgtgcaagccgaggatgattga
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