Fusarium verticillioides: FVEG_02720
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Entry
FVEG_02720 CDS
T04869
Name
(RefSeq) DNA excision repair protein ERCC-8
KO
K10570
DNA excision repair protein ERCC-8
Organism
fvr
Fusarium verticillioides
Pathway
fvr03420
Nucleotide excision repair
fvr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
fvr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
FVEG_02720
09124 Replication and repair
03420 Nucleotide excision repair
FVEG_02720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fvr04121
]
FVEG_02720
03400 DNA repair and recombination proteins [BR:
fvr03400
]
FVEG_02720
Ubiquitin system [BR:
fvr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
FVEG_02720
DNA repair and recombination proteins [BR:
fvr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
FVEG_02720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_EIPR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_RFWD3
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_Nup120_160
Beta-prop_DCAF4
Beta-prop_SPT8
WD_LRWD1
VPS8_N
Motif
Other DBs
NCBI-GeneID:
30060909
NCBI-ProteinID:
XP_018746442
UniProt:
W7LP45
LinkDB
All DBs
Position
5:2166074..2168406
Genome browser
AA seq
480 aa
AA seq
DB search
MQSNLLARETGDLRHEDFTRSITSELLRSFAPAPQHRFNGERTSKHSPADIDERTHNIRA
HGAGVNTLALEKFDGRILLSGGAEGGIKVWNLEDAGNPNKLHTFRPVSSIARSTREESSP
GHSHGVTHVAFYPFDPDAFLSSSYDKKLKLWATQRCTLSATFDLNATIYSHSTSPVADHL
IVACATQNPAVRLVDLKSGSAVQALVAHGGPVLSTAWSPRHEHILVSGHADGKVRIWDIR
RSGGVVALLDQEDSLGIVHKMKHLSAAGVDSSQIPHFRTSAQAHDDAVNGLQWTDDGKYI
ISAGLDRRIRVWDAATGANTLASFGSLIQNQHAKTASILVSPAHLTSGNNLLFWPNDQEI
LILDLHDGHVVTRLRSPGVTNPIGPRGGEMGRNRITSIVWRASGGTGRPVGPTMGGGNSV
GAVYSSHMDGKIRAWSPQIPGPEDVAAEEETHEAEEAKQKKRKAVDDAYRSLMGKKITFT
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccaaccttctcgctcgtgaaacgggcgatctccgccatgaagactttactcgg
tccatcacttctgaactcttacgttcctttgcgccggctcctcagcaccgcttcaatggt
gaaagaacgtccaagcatagccctgcagatatagacgagcgtacgcacaatataagagca
catggcgcgggcgttaatacactcgcccttgagaagttcgatggacgtatccttctctct
gggggagccgaaggaggcatcaaggtctggaacttggaagacgctggaaatcccaacaag
ttgcacactttccgccccgtgagcagcatcgccaggtctacgagagaggagtcttccccc
gggcatagtcacggtgtcactcatgttgccttttatcctttcgatccggatgcttttctt
tcaagttcttacgacaagaagctgaagctatgggcgactcagcgttgcactctgtcggcc
accttcgacctgaacgcaactatttactcccactccacaagccctgtagcagatcatctt
attgtggcgtgtgccacgcagaacccagcagttcgtctggtggatttgaaatcagggtcc
gctgtacaagctcttgtagcgcatggcggccctgttttgtcaactgcatggagtccgcgc
cacgagcatattcttgtcagtggccatgcagatgggaaagtcagaatatgggatattcgt
cgttctggtggtgttgtggcgctgctcgaccaggaagactcgctgggtatcgttcacaaa
atgaagcatctcagtgccgcaggggtggattccagccagatcccacacttccgtacctcg
gcacaggcgcacgatgatgcagtgaatggcttgcagtggactgacgatgggaaatacatc
atctcagctggtctcgaccgtcgcattcgtgtttgggacgctgccacgggggccaatact
ctcgccagttttggctcccttattcagaaccaacacgccaagacagcaagtattttggtt
tctccggcgcatctcacaagtggcaataatcttctcttctggccaaatgatcaggaaatt
cttatcctcgatcttcacgatggccatgttgtgacacggctccggagccctggtgtgacg
aaccctatagggccacgagggggcgagatgggaagaaacaggatcacgagtatagtttgg
cgcgcatcaggggggacgggacgcccagttggtcctactatgggtggcggcaactcggtt
ggggccgtatatagctcccatatggacgggaaaattcgagcttggtcaccccaaatacct
gggcctgaggatgtagctgcggaagaagagacgcatgaggcagaggaggctaaacagaag
aagagaaaggctgtcgacgatgcatatagaagtcttatgggcaagaagatcacctttacg
tag
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integrated database retrieval system
