Fusarium verticillioides: FVEG_03581
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Entry
FVEG_03581 CDS
T04869
Name
(RefSeq) hypothetical protein
KO
K14401
cleavage and polyadenylation specificity factor subunit 1
Organism
fvr
Fusarium verticillioides
Pathway
fvr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fvr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
FVEG_03581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fvr03021
]
FVEG_03581
03019 Messenger RNA biogenesis [BR:
fvr03019
]
FVEG_03581
Transcription machinery [BR:
fvr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
FVEG_03581
Messenger RNA biogenesis [BR:
fvr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
FVEG_03581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF_A
Motif
Other DBs
NCBI-GeneID:
30061707
NCBI-ProteinID:
XP_018747658
UniProt:
W7M976
LinkDB
All DBs
Position
2:4285781..4290410
Genome browser
AA seq
1427 aa
AA seq
DB search
MQAYTELAAPSAVTHSLTASLTSATATNLVVAKGSLLQIFTTKAISAEFDPENQPAQTAK
PEPEFDHRANDDDGLESSFLGGETMLVRTDRTNLTKLVLVAELPLSGTVTGLAKVKTKHS
KCGGEALLIAYKAAKLCMAVWDPEKSNLETISIHYYEKEELHGAPWEVSFDEYTNYLEAD
PGSRCAAFQFGSRNLAILPFRQAEEDLEMDDWDEDLDGPRPVKESTTVANGDSDTLEPAY
TPSFVLRLPLLDPSLLHPVHFAFLHEYREPTFGILSSSQERAHSLGQKDHLTYKVFTLDL
QQRASTTILSVTDLPRDLFKIIPLPAPVGGSLLIGENELIHVDQSGKSNGVAVNSMARQI
TSFSLTDQADLNLRLEHCIIETLSIENGELLLVLNDGRIGIVTFQIDGRTVSGLTVRMVA
DENGGNLIKSRASTASKLGKNAYFVGSEVGDSVVLGWTRKMGQEKRRKPRLIDAEIGLEM
DDLDLEDEDDEDDDLYGTESAAAKPAQALNGGGKAGELTFRIHDTLLSIAPIKDLTAGKL
SLHPDSEEATLSRGVVSDLHLTCVVGRGKAGSLAILNRNIQPKIIGRFEFPEARGFWTMS
VKKPMSKALGGNVGVGNEYETFGQHDKYMIVAKVDLDGYETSDVYALTGAGFETLKDTEF
DPAAGFTVEAGTMGKQMRIIQVLKSEVRSYDGDLGLTQILPMLDEETGAEPRVTSASIAD
PYLLLIRDDSSLMLAQIDSNNELEEVEKMDATLQNTKWHSGCLYADIKGAFQPSAGDKGA
ETEKIMMFLLSSTGALHVYALPDLSKPVYVAEGLSYVPPHLSADYTLRRGLAKENLREIL
VADLGDTTSQSPYLILRNQTDDLTIYEPLRHTREGETSLSVTLSFKKTSNTTLATIPVET
EQDDVEQPRFVPLRPCANVNGYSTVFLPGPSPSFVIKSSKSIPRVIGLQGLGVRGMSTFH
TEGCDRGFIYADDKGIARVTQLPPDTNFTELGISVKKVPLGADVRGIAYHQPTGAYIAGC
MISEPFELPKDDDYHKEWAKETLTFPPTMPRGVLKLISPVSWTVIHEVELESCESIECMK
TLHLEVSEDTKERRFLVTVGTAVSKGEDLPIRGRVHVFDIVTVIPEPGRPETNKRLKAIA
REDIPRGGVTAISEIGTQGLMLVAQGQKCMVRGLKEDGSLLPVAFLDMSCHVSTARELPR
TGLCLMADVFKGVWFAGYTEEPYTFKVLGKSHGRLPVLVADFLPDGEDLAIVAADADGDL
HILDFNPEHPKSLQGHLLLHRTSFSVSPNPPSTTLLLPRTLPPSHPSPQDPPHILLLASS
SGHLSALVPLPETTYRRLLSVTNQLLPALTPHGGLNAKAHRLPDGIRPVGVEAAGGRAIV
DGAVLARWAELGAAKRAEIAGKGGYDGVGELREELEGVLGWSGLSYF
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcctacaccgagcttgcggctccctcagccgtaacacactccttgactgcttct
ctcacttcagctacagctaccaatctcgttgtcgcaaagggatccctactccaaatcttt
acaacaaaggccatctccgctgaattcgatcccgagaaccaacctgcccagacagcaaag
cctgaacccgaatttgatcaccgcgcgaacgacgatgatgggctcgagtcgtcgtttctt
ggcggcgagacaatgcttgttcgaaccgatcgcacgaacctcacgaagctagttcttgtc
gcggagcttccactgtccggcaccgtgacgggtttggccaaggtcaagacgaagcactcg
aaatgcggaggtgaagctctcctgatagcatacaaagccgcgaagctatgtatggcagta
tgggaccctgagaagagcaacctcgagaccatctccatccactactatgagaaagaagag
ctacacggcgcaccatgggaggtttctttcgacgaatataccaattacctcgaagccgat
ccaggtagtcgatgtgccgctttccagttcggctcgcgcaatctcgcgatcctaccattc
agacaagcggaagaagacttggagatggatgattgggatgaggatctcgatgggccacgg
cccgtcaaggagtctactacagtcgccaatggagatagcgacacactagaaccagcgtat
acaccatcttttgtactccgtcttccgctccttgatcccagtctgcttcatcccgttcac
ttcgcttttctgcatgagtatagagaaccgacatttggtatcctgtcatccagccaagag
cgagcgcattctcttggccagaaggatcacttgacgtacaaggtctttacgttggatttg
cagcagcgagcttcgacgactattctttctgttaccgatcttcctcgagatttattcaag
attattccgctaccagcgcctgttggcggttcgttgttgataggagagaatgagctgatt
catgtggatcagtctggcaagtccaatggtgtggcggtgaactcaatggctcggcagatt
acctcgttcagcttgacagatcaggcggatcttaacttgcgactggagcactgtatcatt
gagacactgtcaattgagaacggcgagctcctgcttgtgctcaacgatggtcgtattgga
atagtcacgttccagattgatggtagaactgtctcgggtcttaccgtcaggatggtcgca
gatgagaacggcggcaatctaatcaagagccgcgcatcgacagcgtcgaaacttggcaag
aatgcatactttgtgggtagtgaagttggcgattctgtggtgttgggctggacgagaaag
atgggacaggaaaagagacgaaagccgagacttattgatgcggagattgggctggaaatg
gatgatctggatctcgaggatgaagatgatgaggacgatgatttgtacggcaccgaatct
gctgccgcgaaaccggctcaggctctcaatggtggtggtaaagcgggcgagttgactttc
cgcattcacgatacccttctcagcatcgccccgatcaaggacttgacagctggcaagcta
tcactccatcccgacagtgaagaggcaactctgtcacgaggcgtggtttcggatctccat
cttacatgcgtcgtcggacgtggaaaagccggttcactggctattctcaaccgcaacatc
cagcccaagatcattggcaggttcgagtttccagaggcaaggggcttctggaccatgtct
gtcaagaagccaatgtccaaggccctcggtggaaacgttggcgtgggtaatgagtacgag
acatttggacagcatgacaagtacatgatagtcgctaaggtcgatcttgacggttatgag
acgtcggatgtgtatgctcttactggcgcaggcttcgagactctcaaggatactgagttt
gatcccgcggctgggttcactgttgaggctggaacgatggggaagcaaatgaggattatt
caagtcctcaagtctgaggttcgatcttacgatggagatctcggcctcactcagatcctg
ccgatgctcgatgaagaaaccggtgctgaacctcgggtcaccagcgccagcattgctgat
ccttacctcctactcatccgcgacgacagcagtcttatgttggcacagatcgacagcaat
aatgagcttgaggaagtggaaaagatggacgctactctccagaataccaagtggcactct
ggatgtctgtatgcggatataaagggtgctttccaaccgagtgccggcgacaagggtgca
gagactgagaagatcatgatgttcttgctcagctcaactggcgcgctccatgtttacgca
ctccccgatctctccaagcccgtttatgttgccgaaggtctctcctacgtgcctcctcac
ctttcagcagactacacactacgacgtggtctagcaaaagagaaccttcgtgagattctt
gtcgctgatcttggcgacaccacctctcaatctccatacctcattctccgcaaccaaact
gacgacctcacaatctacgaacctcttcgccatacaagagaaggcgaaaccagtctctcc
gtcaccctctccttcaaaaagacctccaacacaacattagccacaatccccgtagagaca
gagcaggacgacgtcgaacaaccacgcttcgttcctctccgaccatgcgcaaacgtcaac
ggctacagcaccgtcttcctccccggcccttcaccaagcttcgtcataaagtccagcaag
agcatcccccgcgtcatcggtcttcaaggcctcggtgttcgcggtatgagcacattccac
accgaaggctgtgatcgcggcttcatctatgccgatgacaagggcatcgcacgagtaacc
caactcccaccagacaccaacttcaccgagctcggcatctcagtcaagaaagtccctctg
ggcgctgatgttcgcggcatcgcatatcatcaaccaacaggcgcatacatcgcagggtgt
atgataagcgagcccttcgaactccccaaagacgacgactaccacaaagaatgggccaag
gaaacactcacgttcccaccaaccatgccccgcggcgttctcaagctcatcagcccggtc
agttggaccgtcatccacgaagtcgagcttgaatcctgcgaatccatcgagtgcatgaaa
acactacacctcgaagtctcagaagatacaaaagagcgtcgcttcctcgtcacagtcggc
acagccgtctcaaagggcgaagacctccccatccgcggacgcgtccacgtcttcgacatc
gtaaccgtcatccccgagcctggcagaccagaaaccaacaaacgtctcaaagccatcgcg
cgcgaagacattccccgcggcggcgtaacagccatttcagagatcggcacccaaggtctc
atgctcgtcgcgcaggggcagaagtgcatggtgcgcggtctgaaggaagacggctccctt
ttgcctgttgcgttcctcgacatgagctgtcacgtatccaccgcgagggaactcccgcgt
acggggctgtgtcttatggctgatgtgttcaagggtgtttggttcgcgggatatacggag
gagccatatactttcaaggtcttgggtaagagccatggccggttaccggttctggtggcg
gatttcctgccggatggtgaagatctggctattgttgctgcggatgcggatggtgattta
catattctcgactttaaccccgaacatcctaaatctcttcagggccatctcctcctccac
agaacctcattctccgtctcccccaatcccccctcaacaacactcctcctccctcgaacc
ctccccccctcccatccctctccccaagaccctccacacattctcctcctcgcctcttca
tccgggcacttatcagcactcgtcccgctccccgagacaacctaccgtcgtctcttgtca
gtaacaaaccagctactccctgcacttacaccacacggcggattgaatgccaaggcgcat
aggttacctgatggtatacgacctgtaggcgtagaagcagctggcggaagggcgattgtt
gatggagctgttttggcgaggtgggcggagcttggtgctgcgaagagggcagagatagcg
ggtaaggggggttatgatggtgttggggagttgagagaggagcttgagggtgttttggga
tggagtgggttgtcgtatttctag
DBGET
integrated database retrieval system