KEGG   Fusarium verticillioides: FVEG_04240
Entry
FVEG_04240        CDS       T04869                                 
Name
(RefSeq) hypothetical protein
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
fvr  Fusarium verticillioides
Pathway
fvr03018  RNA degradation
fvr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fvr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FVEG_04240
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FVEG_04240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fvr03019]
    FVEG_04240
   03041 Spliceosome [BR:fvr03041]
    FVEG_04240
Messenger RNA biogenesis [BR:fvr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     FVEG_04240
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     FVEG_04240
Spliceosome [BR:fvr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    FVEG_04240
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 30062321
NCBI-ProteinID: XP_018748622
UniProt: W7LV55
LinkDB
Position
2:complement(2283405..2284496)
AA seq 123 aa
MLPLGLLNAAQGHPMLVELKNGETLNGHLVSCDTWMNLTLKEVVQTSPEGDRFVRLPEVY
VKGNNIKYLRVPDEIIDQVSESQKGQQGGFRGGRGGQSRGDHSGRGDRGRGRGGRGRGRG
RGQ
NT seq 372 nt   +upstreamnt  +downstreamnt
atgctacccctcggactactcaatgccgcccagggccaccccatgctcgttgagctgaag
aacggcgagacactcaacggacacctggtttcgtgcgatacatggatgaacctcacacta
aaggaggtggtgcagacaagtccggagggcgatcgatttgtcaggttaccagaggtttat
gtcaaaggaaacaatatcaaatacctgagagtacccgacgagatcatcgaccaggtcagc
gaatcacagaagggccagcaaggcggtttccgaggcggtagaggaggacagtcaagggga
gatcacagcggtcgtggtgatcgcggacgtggtcgtggtggaagaggccgaggccggggt
cggggccaatga

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