Fusarium verticillioides: FVEG_04240
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Entry
FVEG_04240 CDS
T04869
Name
(RefSeq) hypothetical protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
fvr
Fusarium verticillioides
Pathway
fvr03018
RNA degradation
fvr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fvr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FVEG_04240
09123 Folding, sorting and degradation
03018 RNA degradation
FVEG_04240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvr03019
]
FVEG_04240
03041 Spliceosome [BR:
fvr03041
]
FVEG_04240
Messenger RNA biogenesis [BR:
fvr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
FVEG_04240
mRNA degradation factors
5'-3' decay
Lsm complex
FVEG_04240
Spliceosome [BR:
fvr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
FVEG_04240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
30062321
NCBI-ProteinID:
XP_018748622
UniProt:
W7LV55
LinkDB
All DBs
Position
2:complement(2283405..2284496)
Genome browser
AA seq
123 aa
AA seq
DB search
MLPLGLLNAAQGHPMLVELKNGETLNGHLVSCDTWMNLTLKEVVQTSPEGDRFVRLPEVY
VKGNNIKYLRVPDEIIDQVSESQKGQQGGFRGGRGGQSRGDHSGRGDRGRGRGGRGRGRG
RGQ
NT seq
372 nt
NT seq
+upstream
nt +downstream
nt
atgctacccctcggactactcaatgccgcccagggccaccccatgctcgttgagctgaag
aacggcgagacactcaacggacacctggtttcgtgcgatacatggatgaacctcacacta
aaggaggtggtgcagacaagtccggagggcgatcgatttgtcaggttaccagaggtttat
gtcaaaggaaacaatatcaaatacctgagagtacccgacgagatcatcgaccaggtcagc
gaatcacagaagggccagcaaggcggtttccgaggcggtagaggaggacagtcaagggga
gatcacagcggtcgtggtgatcgcggacgtggtcgtggtggaagaggccgaggccggggt
cggggccaatga
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integrated database retrieval system