Fusarium verticillioides: FVEG_04682
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Entry
FVEG_04682 CDS
T04869
Name
(RefSeq) hypothetical protein
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
fvr
Fusarium verticillioides
Pathway
fvr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fvr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FVEG_04682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvr03019
]
FVEG_04682
Messenger RNA biogenesis [BR:
fvr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
FVEG_04682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
30062727
NCBI-ProteinID:
XP_018749231
UniProt:
W7M645
LinkDB
All DBs
Position
4:complement(1047549..1050456)
Genome browser
AA seq
810 aa
AA seq
DB search
MEQSQDFKSLQESVQKSLISTIKTVNRIAAEDLSFQRTVNPSVGQLLEDRTSRILELSTH
LLLTTGKACGVKAPKLEDVEDIEMNWRGVVDVVDSSLEKADTALDEYTGLVKRKEPPLPD
TANKPKKPKSTNKVIRNANMTKPQLLFERKPDNFAPAPWKPMLTSKPNAKLSLEESLKVV
LNEAGTPQYQHPYEHEIVRMSYPKRVFKESEPIMYQPVETTAATFVDTYEGVLEMLEELK
GAKEIAIDLEHHDFRSYVGLVSLMQISTREKDWIVDTLQPWRHKLEVLNQVFTDPNIIKV
FHGAYMDMVWLQRDLGLYVNGLFDTFFACEQLHYPAKSLAYLLSKFVDFDADKQYQLADW
RIRPLPEEMMYYARSDTHYLLYIYDRVRNELVAASDRGDVDKDYIGRAVEKSKEQSLSRY
EHPGYDEETGEGSRGWYGYIFKNSHLALDSEQFAVFRALWKWRDDTARKEDESTNYVLST
RDITEIARINPPDAKALHSLLPLNASLARPRFNEIWEQIKGTKAKGGLSLLHFFTSMAPD
SVRKNGMPIAARQTAKLPVLDGEVTVSRLTRSQLFGDMPISSKWDTSTRPTETGEELIPF
PWQRFIRQGSIKEDVQHDTAAEEVKISEPTDTVESAAGNAKVEEVDEEFTLRRGQKRKSQ
AIEESEPSEESTDSSQYDSDEEMQEGSGVIAVEDEPSPKASRSARRKLRKAEEKKAEEER
IRRQEAKKARKAQKKQKKQDDKTKKFDAVPFDYSKATSVLHSNRESNVGQADGKGKKKVF
DPYSKSADTDIKGARKAPPVRGERSATFKR
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggagcaatctcaagacttcaagtctctccaggagagtgtccagaagtcactgatttcc
acaattaagaccgtgaaccgaatcgctgccgaagacctaagtttccaacggactgtcaat
cctagcgtgggccaactactcgaagatcgaacttcgcggatccttgaactctccacacat
cttcttctgactaccggtaaggcgtgtggtgtcaaggcgcccaagcttgaagatgtggaa
gacatcgaaatgaactggaggggcgttgtcgatgttgtcgattcatcactcgagaaggcc
gacacagccttagatgagtacacagggcttgtcaagagaaaggagccacccttacctgat
accgcgaacaagcccaagaagcccaagtccacgaacaaggttatccgaaatgccaatatg
accaagcctcaactcctcttcgaacgaaagcctgataactttgctcctgctccatggaaa
ccgatgcttacgtcgaagccaaatgccaaattatctttggaggaaagcctcaaggtcgtc
cttaatgaagccggcacgccacaataccaacatccttatgaacacgaaattgtccgtatg
tcatatccgaaacgagtattcaaggaatccgaacccatcatgtaccaaccggtcgaaaca
accgcggccacttttgtcgacacctacgagggcgttctggagatgctggaggaactgaag
ggcgccaaggagattgcgatcgatctggaacaccacgattttaggtcctatgttggactt
gtgtctctcatgcaaatcagcacgcgagagaaggactggatcgtagatactctacaaccc
tggcgccataaacttgaggttctgaaccaagttttcacagatcccaatatcatcaaggtt
ttccatggcgcatacatggacatggtttggcttcagcgagatttgggattgtatgtgaat
ggactcttcgatacgttctttgcgtgcgagcaactccactatccagccaagagtttagcc
tacctgttgtctaagttcgtcgattttgatgcagacaagcagtatcaattggctgactgg
aggatacgcccactacccgaggagatgatgtactatgctcggtccgacacccactacctg
ctctacatctacgatcgggtacgaaatgagcttgttgctgcctccgatagaggtgatgtc
gataaagactacattggccgggcagtggagaagtcgaaggaacagtcactttcccgctac
gaacatcctggttacgatgaagagactggtgaaggctcccgtggatggtatgggtatatc
ttcaagaactcgcacttagcactcgatagcgaacaatttgctgtcttcagagccttgtgg
aagtggagagatgacactgccaggaaagaggacgagagcaccaactacgttctcagcacc
agggatatcacagagatcgcccgaatcaacccgccggacgcaaaggccttacacagcttg
ttacccctgaatgcgtctctagcacgaccacgtttcaatgagatctgggaacaaatcaaa
gggaccaaggcaaagggtggactcagcttgcttcacttcttcacctcgatggcgccggat
agcgtgagaaagaatggaatgcctattgcagccaggcaaactgcaaagttaccggtcctt
gatggagaggtcacggtcagtaggctgactcggtcgcagttatttggcgatatgccgatc
agctctaaatgggatacttcaacgcgaccaaccgaaaccggggaggagcttattccgttc
ccttggcagagattcatacgacaaggctcgattaaagaagacgttcaacacgatacagcc
gccgaagaggtcaaaatctctgagccaacagatactgtggagagtgcagctggcaatgct
aaggttgaagaggttgacgaagagtttacgttgaggagaggtcagaagcgaaagtcgcaa
gcgatcgaagaatctgagccaagcgaagagagcacggattcatcacaatatgatagtgat
gaggagatgcaagagggtagtggagtcatcgctgtcgaagatgagccctcaccaaaagcg
tccaggagcgctcgtcgcaagcttcgcaaggcagaggagaagaaggctgaagaagagcga
atccgacgacaagaagcgaagaaggctcgcaaagctcagaagaagcagaagaagcaggac
gacaaaaccaagaagtttgacgcagtgcctttcgactatagcaaggctacctcggtgctc
cattcaaacagggaatctaatgttggacaggcagacggaaagggcaagaagaaggttttc
gacccctactcgaagtctgcggacacggacatcaagggagcacgcaaagcgcccccagtg
agaggagagcgaagtgcaacattcaaaagataa
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