Fusarium verticillioides: FVEG_06272
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Entry
FVEG_06272 CDS
T04869
Name
(RefSeq) hypothetical protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
fvr
Fusarium verticillioides
Pathway
fvr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fvr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FVEG_06272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvr03019
]
FVEG_06272
Messenger RNA biogenesis [BR:
fvr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
FVEG_06272
mRNA degradation factors
5'-3' decay
Decapping complex
FVEG_06272
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
30064184
NCBI-ProteinID:
XP_018751692
UniProt:
W7M3E9
LinkDB
All DBs
Position
2:1376153..1381251
Genome browser
AA seq
814 aa
AA seq
DB search
MSFFGFDTTRHNTAAPGFSQSHDPFAGLSGRDGDDDALDFEETYDGLGDQLEETGDAFND
DTFGDSGPAVSRSAGKDFDFFGQTAKVANAINEEHLRYNRQGPATKPAASAQAHSSVNQY
ASADYQSYYSNQPYQQQSYQQPVRSGYEKYREPEALPDLHVDRSIWGIGPSKPAQQASPA
PVPAAQPAQHAPSRKVMSLEEVEAAMRSQPKQQTPQPHAADLSYQQPPPGFTAHQQQPPQ
AHGHGHPVTILQRPQSTQSKPTPPAPGLQATPVQHQQQLHANPTQILQNPNRAGPDAHVP
PQHGHHSKQSHSAIPNAAQLQAHPQMQQMSEEEKAAYLDQETKRAKRNHKIWLLSKDNGL
MTPQDKNFITRIQLQQLVSATGNPVEGSDASIAEDFYYQVYSHIRAGQRQNPSQPLSNFA
QTYLYQTGSRQGGMRRHGRPAENHFQRMEQQVQRAVEAAKNKPKNPQLVIAGSLGKISFS
NAKTPKPLLSIKRTESEHQRPNNGKKGSSLDRKTILRNVEKVYQTLMQIEDHVRLIPPPM
TGPDEELENKHKEWATILETYNAKLWQELKVHEQIGVVVPHPFIAFLSCAKGEKAIPRLF
PHLSFEQRTTILTMIIYHLDQLDVVQGAAITPGEVTTINARMREKIELFISTVMPSLMQY
FNDTGLDIVDGVLNLIATKLNVDLISRSRIGVSMLTLILSRAVLLKQTGAGTPEQWDNWD
RTFEILFSRLEPSLPYIFPGSVNTGEDVYVWQLLAAMGVSATHDQQTRLVLAVKDRVLDT
VTVSKTLPPAMGAERLNSVNLFMRSIGLDVELLQ
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcttcggtttcgacaccacgcgccataacacggctgcgcctggcttctcccaa
tctcacgatccatttgctggtttatcaggcagggatggtgatgatgatgctctagatttc
gaggagacttatgacggtcttggagaccagctcgaagagactggagacgctttcaacgac
gacactttcggcgacagtggcccggcagtctctcgcagtgctggcaaggatttcgacttc
tttggccagactgccaaggttgcgaatgccattaatgaggagcatcttcgctacaaccgc
caggggcctgcgactaaacccgctgcttctgctcaggcgcattcttccgtcaaccaatat
gcctcggccgactaccagtcttactactctaatcagccttaccagcaacagtcttatcaa
cagcctgtgcgatctggttacgagaagtaccgcgaacccgaggcgctccctgatctccat
gttgaccgaagcatctggggcattgggccgtctaagccagcccagcaagcatcgcctgct
cctgttcctgcagctcagcctgcccagcatgcgcccagtcgcaaagtcatgagcttggaa
gaggtcgaggccgccatgcgatctcagcccaagcagcagacacctcagccacatgccgca
gatctttcctatcaacaaccgcctcccggatttactgctcatcagcaacagcctcctcag
gcccatggtcatggccacccagtgactatcctgcagaggccccaaagcactcaatcgaag
cccacgccgccagccccaggtcttcaagcgactcccgttcagcatcagcagcagctccat
gccaacccgacccagattctgcagaatcccaaccgcgccggcccagatgcgcatgttcca
cctcagcatggacaccactccaagcagtcccacagtgccatccctaatgccgcgcagtta
caagctcacccccaaatgcagcagatgtccgaggaagagaaggccgcctatctggatcaa
gagaccaagagggcgaagcgaaaccacaagatctggcttctgtcgaaggacaatgggttg
atgactccccaggacaagaatttcatcacccgtatccagctccagcagctcgtttccgct
actggtaaccctgtcgaaggatctgatgcttcaattgccgaggacttctactaccaggtt
tacagccatatccgggctggtcagcgtcaaaaccccagccagcctctgagcaacttcgcc
cagacatacctgtaccagactggtagtcgtcagggtggtatgcgtcgccatggacgtccc
gccgagaatcacttccaacgaatggagcagcaggtacagcgtgctgttgaagctgccaag
aataagcccaagaaccctcagctggtcatcgcaggcagtctaggaaagatctcctttagc
aacgcgaagacccctaagcctctcctcagcatcaagcgaaccgagagtgagcatcagcgc
cccaataatggcaagaagggatctagccttgatcgaaagaccatccttcgaaatgttgaa
aaggtttatcagactctgatgcaaatcgaggatcatgttcgacttatcccaccccccatg
accggccccgatgaggagcttgagaacaagcacaaggagtgggccaccattctcgagacc
tataacgccaagctctggcaagagcttaaggtccatgagcagattggagttgttgttcct
catccattcatcgctttcttgtcttgtgccaagggtgagaaggccattcctcgtcttttc
cctcatctctcttttgaacaacggactactatcttgaccatgattatctatcatctcgac
caattggatgtcgtccagggcgctgctattacaccgggcgaggtgacaaccatcaatgca
cgaatgcgagagaagattgaacttttcatctctactgttatgccatcgctgatgcaatat
ttcaacgatactggcctggatattgttgatggagttttgaatctgattgccaccaagctc
aacgtcgatctcatttcgagatcaagaattggtgtgtccatgttgacacttattctcagt
cgtgccgtgcttctcaaacagacaggcgccggcactcctgagcagtgggataactgggat
cgaacatttgagatcttgttcagtaggctcgaaccttcgctgccttacattttccctggt
agtgtcaacactggagaggatgtctacgtatggcagcttcttgcagctatgggcgtcagc
gccactcacgaccagcaaactcgcctggtccttgctgtcaaggaccgtgtgctcgacact
gtcactgtttcgaagacactccctcctgctatgggagcagagcgactgaacagtgtcaac
ttgttcatgcgatccattggtttggatgtcgagcttctccagtaa
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