Fusarium verticillioides: FVEG_07941
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Entry
FVEG_07941 CDS
T04869
Name
(RefSeq) hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
fvr
Fusarium verticillioides
Pathway
fvr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fvr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FVEG_07941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvr03019
]
FVEG_07941
Messenger RNA biogenesis [BR:
fvr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
FVEG_07941
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
FVEG_07941
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Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
PCB_OB
Motif
Other DBs
NCBI-GeneID:
30065706
NCBI-ProteinID:
XP_018754182
UniProt:
W7MAG4
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All DBs
Position
3:1378427..1379107
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AA seq
208 aa
AA seq
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MAVDDIPSIVLPGNILGPVTKFAPGPGTHVYEGNVVSSLLGRVTVTPPAKPPGPQKRLNK
ITAPTTEELATISVARHGHKREVLPDVENIVLARVLRLMPKQAIVVIQQVGDTVLQTEWQ
GVIRVQDVRATEKDKVKIYESFKPGDIVRAQVISLGDQANYYLSTASNELGVVMATSEAG
NDMVPISWKEYRDPETGICEPRKVAKPS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcgacgacattccctccattgttctgcctggcaatatcctaggtccggtcact
aaatttgcgcccggacccggtacacatgtttacgagggcaatgttgtttcttctctgctt
ggccgagtcactgtgacacccccggcaaagccccccggccctcaaaagcgtctcaacaag
atcactgcacctacgacagaggagctggctactatctccgttgcccgccatggccacaag
cgcgaggtactgcccgacgtcgagaatattgtccttgcgcgagtcctgcgcctgatgcca
aagcaagcgattgtggtgatccagcaagtcggcgacacagttttgcagacagagtggcag
ggtgtgatcagagtgcaagacgtaagggcaacagaaaaggacaaggtcaagatttacgag
tcttttaagcctggcgacatcgtccgcgcgcaagtgatatctcttggagaccaggccaac
tactacctatcaacggcttcgaacgaattgggcgttgtcatggctacgagcgaggcgggt
aatgatatggtccctatcagttggaaggaatacagagatcccgaaacaggcatttgcgag
cctcgaaaggttgcaaagcccagctga
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