Fusarium verticillioides: FVEG_11355
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Entry
FVEG_11355 CDS
T04869
Name
(RefSeq) transcription initiation factor TFIIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
fvr
Fusarium verticillioides
Pathway
fvr03022
Basal transcription factors
fvr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fvr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FVEG_11355
09124 Replication and repair
03420 Nucleotide excision repair
FVEG_11355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fvr03021
]
FVEG_11355
03400 DNA repair and recombination proteins [BR:
fvr03400
]
FVEG_11355
Transcription machinery [BR:
fvr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FVEG_11355
DNA repair and recombination proteins [BR:
fvr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FVEG_11355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
DHC_N1
Motif
Other DBs
NCBI-GeneID:
30068875
NCBI-ProteinID:
XP_018758877
UniProt:
W7MNN0
LinkDB
All DBs
Position
9:complement(1194613..1197612)
Genome browser
AA seq
645 aa
AA seq
DB search
MAIPVGRTLFKKKEGILTLTSDHQLVTWTPNSGGPATVSLNINNITNLQQTPDSSPKVML
KIFEKVGDAEPATYLFHFNTAEAKDEAKAVKDLLSSLLASTRGNDGSVQKQSGASGGSST
PNPGAGGGSGSASMAFASAVNSQNASSSRWFDDSQLKNDIELQQSLMRKDTSLHQTYVEA
MQTKPDSLSGAAFNSQFWSTRTNLLRAHAIEINQKKGAYNVLSTVKPKTVDGELKLNISV
EQVQMIFAQHPLIKRVYNENVPKISEADFWSRFFLSRLSKKLRGERVAENDPHDPLFDKY
DPAENTVAFQSKIMANQVPHFIDIEANEENQGGFKSGNAKDVEMRPRANIPIVKTLNSLS
EKIMANVAPSDVNTDDPDGGYNAYVQLALRDLKGDAKEHRIMLNVKEQNKFFSKHDSAPS
KQAAVFERQVPSEVLFEIVGDLETLESDGAGGINIQAAMGFDEDSESDEDTPKRPHVGSR
FALLAADKDIMKGVRQQRAQKYGHETDAAEPMGLPVEISRKCSLTHATTIEFLHQFWNAF
LSGDPDRAGELQYLAESLGRSLARINAVAEEADKEREEIIRSRKKEIRDHFQRTGKKIRW
RSDNVGGGKAAVIALMQPTMNALEKAQADYSRALAAEGIQISTEA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggccatcccagtgggacgtacccttttcaaaaagaaggagggcattctgactctcaca
agtgaccatcagctggtcacttggactcctaactcaggaggccctgccacagtctcgcta
aacataaataacatcacaaacctccagcagaccccagattcttcaccaaaggttatgctc
aagatctttgaaaaggttggagacgcagagcctgctacatatctctttcacttcaatacc
gccgaggccaaggacgaggcaaaggctgtcaaggatctgttatccagcctattagcgtct
acgcgcggcaacgatggttctgttcaaaaacaatccggcgcaagtggtggctcttcaacg
cccaatccaggcgctggtggtggcagcggttccgcatccatggccttcgccagcgctgtc
aactcacagaatgcttcatcctcgcgctggttcgacgactcgcagctcaagaacgacatc
gagttgcaacagtcgctcatgagaaaagatacaagtctccatcaaacatacgttgaagca
atgcagaccaagcccgactccttgtcaggagccgcctttaattcacagttctggtcaacc
cggacaaatcttctccgagcccatgctattgagataaaccagaagaaaggagcctataat
gtcctctcaaccgtcaaacccaagactgttgatggcgaactaaagttaaacatcagcgta
gagcaggtgcagatgatattcgcacaacatcctctgatcaagcgtgtatacaacgagaat
gtccccaagatatccgaagcggacttctggtcccgtttcttcctcagcagactttccaaa
aagctacgcggtgagagagtcgctgagaacgacccccatgaccctttgttcgacaaatat
gaccctgctgagaatacggttgcctttcagagcaaaatcatggcaaaccaagtaccgcat
tttatcgacatcgaggccaacgaagaaaatcaaggaggcttcaaaagtggaaacgcgaag
gatgtcgagatgcgtccaagggccaatataccaattgtgaagaccctcaatagcctcagt
gagaagatcatggccaacgttgccccttctgatgtcaacactgatgatcccgatggcggc
tacaacgcttatgtccagttggctttgcgtgatttgaagggcgacgcgaaggagcatcgt
atcatgctcaacgtgaaagagcagaacaagttcttttcaaaacatgactctgccccctcg
aaacaagctgcggttttcgaaagacaagttcctagcgaagttctgttcgagatagtggga
gatctcgagactcttgagagcgatggtgctggcggaataaatattcaggcagcaatggga
tttgatgaagacagcgaaagtgatgaagatacccccaaacggccacatgttggatcacgc
ttcgctctcttagctgctgacaaggacatcatgaagggcgtgcgccagcaacgcgctcaa
aaatacggccacgagacggatgccgctgaacccatggggctccctgttgagatttcccgc
aagtgcagccttacccacgcaactaccatcgagttcctgcatcaattctggaacgcattc
ctctcgggagacccggaccgcgctggtgagctacagtacctagctgagtctctcggccgc
tcactggcacgtatcaatgccgtcgcagaagaagccgacaaggaacgcgaggaaatcatt
cgcagccggaagaaggagatccgagaccatttccagcgaaccggcaagaagatcagatgg
cgatccgataatgttggaggtggcaaagctgccgtgattgctttgatgcaaccaactatg
aatgctttggaaaaggctcaagccgactactcaagggctctagcagcagaagggatacag
atatcgactgaagcatga
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integrated database retrieval system
