Fusarium verticillioides: FVEG_11419
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Entry
FVEG_11419 CDS
T04869
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase prp43
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
fvr
Fusarium verticillioides
Pathway
fvr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fvr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FVEG_11419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fvr03041
]
FVEG_11419
03009 Ribosome biogenesis [BR:
fvr03009
]
FVEG_11419
Enzymes [BR:
fvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FVEG_11419
Spliceosome [BR:
fvr03041
]
Complex A
U2 snRNP components
U2 related factors
FVEG_11419
Complex B
FVEG_11419
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
FVEG_11419
Ribosome biogenesis [BR:
fvr03009
]
Eukaryotic type
90S particles
Helicases
FVEG_11419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
HA2_N
SRP54
AAA_19
T2SSE
AAA
NB-ARC
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
30068935
NCBI-ProteinID:
XP_018758987
UniProt:
W7MNY7
LinkDB
All DBs
Position
7:2079161..2082969
Genome browser
AA seq
767 aa
AA seq
DB search
MSDIKGGKRSSADADESTRKKAKKDGEDEKYNPYLAHMYDNGNSNGNGAEPSPDSPLAGM
KRQHTTAAQASKAEDSESNPFTGRPHSQKYFQILQGRRDLPVHKQRQEFLDKYHSTQILV
FVGETGSGKTTQIPQYVVYDELPHLTGKLIACTQPRRVAAMSVAQRVADEMDVTLGEEVG
YSIRFEDMTGPKTMLKYMTDGMLLREAMHDHEMSRYSCIILDEAHERTLATDILMALLKQ
ISMRRPDLKIIIMSATLDAQKFQKYFNDAPLLAVPGRTHPVEIFYTPEPERDYVEAAIRT
VLQIHASEPEGDVLLFLTGEDEIEDACRKISLEADELMREVDAGPLAVYPLYGTLPPHQQ
QRIFDKAPPPIRKGGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESL
LVSPISKASAQQRAGRAGRTKPGKCFRLYTEKAFKKELIEQTYPEILRSNLANTVLELKK
LGVEDLVHFDLMDPPAPETMMRALEELNYLACLDDDGELTTLGSMASAFPLDPALAVMLI
SSPEFYCSNEILSITSLLSVPQIFTRPANNRKRADEMKAQFAHPDGDHLTLLNAYHAFKG
QATSDPNSAKQWCHEHFLSYRHLSSADNVRAQLKRIMETHGLELVSTPFEDKNYYTNIRR
ALLAGFFMQVAMKESSGKLYRTVKDDQAVLIHPSTVLRTEFDWVLYNEFVLTSKQYIRTC
TGIRPEWLLEIAPTYYDIDSFEQGDVKRSLARAAEKKRRKEAMKAGR
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatatcaagggaggaaagcgttcaagcgccgacgccgacgaatctacgcgaaag
aaggccaagaaggacggcgaggacgagaaatacaacccctaccttgctcacatgtacgac
aacggtaacagcaatggtaatggcgcagagccttcgccggactctcctctcgccggtatg
aagaggcagcatactaccgctgcccaggcttcaaaagctgaggactctgagtcgaaccct
ttcaccggccgacctcattcgcaaaagtacttccagattctccagggccgtcgcgatctg
ccggtccacaagcaacgacaagagtttttggacaagtatcactcaacacagattctcgtc
tttgtcggtgagacaggttctggaaagactactcaaattcctcagtatgtcgtctacgac
gagctacctcatcttaccggcaagcttatcgcctgtacgcagccacgtcgagtcgccgcc
atgtcggtcgcccagcgtgtcgccgacgagatggacgtcaccctaggcgaggaagttggt
tacagcattcgtttcgaggacatgacaggtcctaagactatgctcaagtacatgactgat
ggtatgcttctgcgcgaggccatgcacgaccacgagatgtctcgctacagttgtatcatt
ctcgatgaggctcacgaacgtactctcgcgaccgatattctcatggctctgctcaagcag
atttctatgcgccgtcccgacctcaagatcattatcatgtctgctactctcgatgctcaa
aagttccaaaagtatttcaacgatgcgcccctgctcgctgtccccggtcgaacacaccct
gtcgagatcttttacacccccgagcctgagcgcgattacgtcgaggccgccataagaacc
gttctccagattcacgcttcagagcctgagggtgatgttttgcttttccttactggtgaa
gacgagattgaggacgcttgtcgcaagatcagcctcgaggctgatgagctgatgcgcgag
gtcgacgctggtcctctcgccgtttaccctctatatggtaccctgcctccccaccagcaa
cagcgcatcttcgacaaggcccctccgcctattcgcaagggcggtcgtcctggtcgcaag
gtcattgtttccaccaatattgccgaaactagtttgactatcgacggtatcgtctatgtc
gtggatcctggttttagcaaacagaagatctacaaccctcgtatccgtgtcgagtccctt
cttgtctcgcccatctccaaggcttcagcccagcagcgtgctggtcgtgctggtcgtacc
aagcccggaaagtgtttccgtctgtacaccgagaaggcattcaagaaggagcttattgag
caaacatatcccgagattctgcgctccaaccttgccaacaccgttctggagctaaagaag
cttggtgtggaggatcttgttcacttcgatcttatggacccccccgctcccgagaccatg
atgcgcgccctggaggagctcaactatcttgcctgtcttgacgacgatggtgagctgacc
actctcggcagcatggcctcagcattcccccttgatcccgctctggcggtcatgcttatc
tcgtctcccgagttctactgctccaacgagattctctctattacctcgcttctctcagtt
cctcaaatctttactcgccctgccaacaaccgaaagcgcgccgatgagatgaaggctcaa
ttcgcgcatcctgatggtgaccacctcaccctgctcaacgcctaccacgctttcaagggc
caggcaacatctgaccccaacagtgccaagcagtggtgccacgagcacttcctctcctac
cgacatctctcaagtgcggataacgttcgcgctcagctcaagcgcatcatggagacgcat
ggcttggagcttgtgtcgacaccattcgaggacaagaattactataccaacattcgacgc
gcactgctcgccggtttcttcatgcaggtcgccatgaaggagagctcaggcaagctctat
cgcactgtcaaggacgaccaggctgtgttgattcacccctcaactgtcctccgcaccgag
tttgactgggtcctctacaatgagtttgtcttgacatccaagcaatacatccgaacatgt
acgggtatccggcctgagtggttattggaaattgcccctacatactacgatatcgacagc
tttgagcaaggtgacgttaagcgttctcttgcacgcgctgcagagaagaagcgccgcaag
gaagccatgaaggctggtcgatga
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