KEGG   Fusarium verticillioides: FVEG_11552
Entry
FVEG_11552        CDS       T04869                                 
Name
(RefSeq) hypothetical protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
fvr  Fusarium verticillioides
Pathway
fvr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fvr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FVEG_11552
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fvr03019]
    FVEG_11552
Messenger RNA biogenesis [BR:fvr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     FVEG_11552
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     FVEG_11552
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 30069059
NCBI-ProteinID: XP_018759215
UniProt: W7MZ04
LinkDB
Position
7:complement(2508161..2509498)
AA seq 201 aa
MPLHRAAVRRNRSHSCRRRCSPLQRSSWISQTVRLRHGTSLFLFPVHERRVGLDKKQGER
EGSCADDCIIAEKLMVALRDGRKLIGVLRSWDQFANLVLQSTVERIFAPSPESAGSDRPT
GLYADINHGIFLVRGENVLLLGEIDLDRDDDPPPGFEPGDLDVVKKLAEEKKAVDKAREK
ARVKKLAKQGFEGENIGEIVL
NT seq 606 nt   +upstreamnt  +downstreamnt
atgcccctccacagggccgcggtgcgccgcaaccgctcccacagctgccgccgcagatgt
tcaccactgcagcgcagctcctggatctcacagacagtacgactccgccatggtaccagt
ttattcctgtttccggttcatgagagaagggttggactcgataaaaagcagggagaaagg
gaaggatcgtgtgctgacgactgtataattgcagagaagctcatggtcgctttgcgcgat
gggagaaaactcatcggcgtgctaagaagctgggatcaattcgccaatctcgtcctccaa
tctaccgtcgaacgtatcttcgcgccctcccccgagtcagcaggtagcgatcgaccaacg
ggtctgtacgccgatataaatcacggcatattcctcgtccgaggtgaaaacgtgctcctc
cttggtgaaatcgatctcgacagggacgacgatccgcctcctggctttgagcccggagac
ctagacgttgtcaagaagctcgcagaggagaagaaagccgtcgacaaagcaagggagaag
gcgcgagtcaagaagcttgcgaagcagggctttgagggggagaacattggcgagattgtg
ctttag

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