Fusarium verticillioides: FVEG_12772
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Entry
FVEG_12772 CDS
T04869
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
fvr
Fusarium verticillioides
Pathway
fvr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
fvr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
FVEG_12772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fvr03021
]
FVEG_12772
03019 Messenger RNA biogenesis [BR:
fvr03019
]
FVEG_12772
Transcription machinery [BR:
fvr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
FVEG_12772
RNA polymerase I system
FVEG_12772
Messenger RNA biogenesis [BR:
fvr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
FVEG_12772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5_N
Spt5-NGN
CTD
KOWx_SPT5
KOW5_SPT5
KOW4_SPT5
KOW2_Spt5
KOW1_SPT5
KOW
Cornifin
Motif
Other DBs
NCBI-GeneID:
30070182
NCBI-ProteinID:
XP_018760779
UniProt:
W7MT01
LinkDB
All DBs
Position
3:133464..137178
Genome browser
AA seq
1051 aa
AA seq
DB search
MSSHDPSRFDDSEDEEDFNPAPADMSDEEQDGDDKKTKRGSSPAPRDDDDDEDERPSKSR
HADDDGEEEEEDEDDNPKRRDDDDDEEEEEEDEEDDEDEDDVQQGHRRKRRKERGAAFFD
IEAEVDDEDEAEDDEMLGEEIGDFITNDHPDDMAETGIDDDRRHRELDRRREIDSSMDAE
KQAEILRQRYGNRRSGKGFRDASVVPKRLLLPSVDDPSIWAVRCKEGKEREVVFSIMKRI
EERAGTKDELAITAAFERGGTDSVMKGFVYVEARRQTDILKGLDSMMNVYPHSKMVLVDI
KDMPELFRVSKTPSLEPGAWVRLRRPMKHNGDLAQVIDVTENGLEARVRFIPRLDYGMRD
DAFSSVTADGKRKRPFGMAGPKPPQRLFSEVEARKRHPRHIQGNPTAGTWTYMGDEFENG
FQVKDIKIQQLITTDVNPSLEEVTRFASGAEDGTENLDLKALAHSLKDSNALATYLPGDI
VEVYTGEQKGVVGKAMRVHSDVVSITVTEGDLVGQEIDVPIRSLRKRFKIGDHVKVIGGS
KFRDEVGMVVNIKDDQVTLLTDQTNSEVTVFSKDLREASDIGGQGSLGQYSLHDLVQLDP
TTVGCVVKVDRESLVVLDQFGDTRQVMPSQIANKLPKRKTAVAADRSGSEIRLEDVVKEY
TGQQRQGKIIHIHRSYVFLHTNDSKENAGVFVTRASMVNTVAAKGGRVAAASSGPDLTAM
NPALKLHKNGAENKPVQQPRSFGRDKAIEQTVIIRKGAYKGLLGIVKDTTDTHARVELHT
KSKTITVPKDSLSFKNKLTGATIDIASRGGRGGYGGGAGRGGGGDRVPGWQGGSRTPMAG
SGSDRVPAWGSRTPAAASGRTPAWKAPDMSGARTPAWADGSRTVNPYDGNRTAYGSGGRT
PAWQAGGRTPAPGDAFGAGSRTPAYGGGGDSWGSGSKTPAWGVSAPTPGASGNDSWGGSG
AYDAPTPGVGLGAPTPGALSAPTPGAYSAPTPAAISAPTPGASWQGGWGADSAPTPAAGA
PTPGYYGAPTPAAYAPPETPAATGPRYTDDD
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctcacgacccttcgcgcttcgacgactccgaagatgaggaagatttcaaccca
gcgcccgccgatatgtccgacgaggagcaagatggcgacgacaagaagacaaagcgcggg
agcagtcctgcgcctcgcgatgatgacgatgacgaagatgagcgaccgtcaaagtcgcga
cacgctgatgacgatggtgaggaggaagaagaggacgaggatgacaatcccaagcgtcgc
gatgacgacgacgacgaagaagaagaagaagaggatgaggaagatgacgaggacgaggac
gatgtccagcagggccatcgcagaaagcgcagaaaggaacgaggagcggctttcttcgat
atcgaagccgaagtcgacgatgaagacgaagccgaagatgacgagatgctgggtgaagag
ataggcgactttatcacaaacgaccatccagacgatatggccgaaactggtattgacgat
gaccgacgacatcgtgagctcgatcgccgtcgtgagatagattcaagcatggacgccgag
aaacaggcagagatcttgcggcagcgatacggtaatcgacgttctggcaagggcttcaga
gatgcatcggttgttcccaagcgactgctcctccctagtgtggacgatcctagcatttgg
gctgtgcgatgtaaagaaggcaaggagcgagaagttgttttctcgattatgaagcgtatc
gaagagagggccggcactaaggatgagctggccatcactgctgcgttcgagcgtggaggt
accgactctgtgatgaagggattcgtctacgttgaagctcgccgtcaaaccgacattttg
aagggcttggacagcatgatgaatgtgtatcctcattcaaagatggttttggtcgatatc
aaggatatgcctgagctgttccgcgtttccaagacaccaagtctggagcctggagcctgg
gttcgtctgcgaaggcccatgaagcacaatggtgatcttgctcaggtcattgatgttact
gaaaacggtcttgaggctcgtgttcgcttcattcccagattggactatggcatgcgagac
gacgccttctcttcagtcactgccgatggaaaacgaaagcgaccattcggtatggctggc
cctaaaccaccgcagaggctctttagcgaggttgaggcccgaaagcgccatcctcgacat
atccagggaaaccctactgccggtacatggacctacatgggtgacgagtttgagaatggc
ttccaggttaaggacatcaagattcaacaacttattactaccgatgtcaatccttcgcta
gaggaagtcactagattcgcttcaggcgctgaggatggcactgagaatcttgatttgaag
gcgctggcccacagtctaaaggacagcaatgctctggctacgtacctacctggcgatatt
gtcgaggtatacactggcgagcagaagggtgttgttggaaaggcgatgcgagttcattcc
gatgtcgtctcgatcactgtcactgagggtgatcttgttggccaggaaatcgacgttcct
atccgatcccttcgcaagcgcttcaagattggtgatcacgtcaaggtcattggtggtagc
aagttccgcgacgaggtcggaatggttgtcaacatcaaggacgaccaagttactcttctg
acagatcagaccaactctgaagtcactgtctttagcaaggatttgcgtgaagctagtgat
atcggtggtcaaggatcactaggtcaatactctcttcatgatctggtgcaacttgatcct
acgactgtgggatgtgttgtcaaggttgatcgcgagtcgctcgttgttcttgaccaattt
ggagacactcgccaggttatgccatcccagattgccaacaaacttccaaaacgaaagact
gctgttgccgctgaccgcagtggctctgagatcagacttgaagatgtagtcaaggagtac
acaggccaacaacgacagggcaaaattattcacattcatcgctcgtatgtcttcctacac
accaacgatagcaaggagaacgctggtgtctttgtcaccagggccagtatggtcaacact
gtcgcggccaagggaggtcgtgtcgctgctgcatcctctggacctgacctgacagcgatg
aatccagcactcaagcttcacaagaacggggcagaaaacaagcccgtgcaacaacccaga
tcatttggccgagataaggcaattgaacagactgttattatcaggaagggagcctataaa
ggtcttttgggtattgtcaaggatacaacagacacccacgcccgggtcgagcttcatacg
aagagcaagactattacggtgcccaaggatagtctgagcttcaagaacaagctgactgga
gctacaattgacatcgctagccggggaggccgtggtggatatggtggtggtgctggacgg
ggaggtggtggtgatcgtgtgccaggatggcagggcggttctcgcacacctatggcaggt
agtggctcagacagagtgcctgcttggggatcacgaacacccgcagctgcaagcggacgc
acacccgcttggaaggctccagatatgtccggagcccgaactcccgcgtgggccgatggt
tcacgaaccgtcaatccttacgacggcaaccgtactgcttatggctctggtggacgtaca
cctgcctggcaggccggtggaaggactcctgctcctggcgatgctttcggtgctggctca
cgtacgcctgcatatggcggtggtggagacagctggggctcaggatccaagactcctgct
tggggagtatctgcgccaactcctggagctagtggaaacgactcatggggaggttcaggc
gcttatgatgcccctacacccggtgttggtctcggtgccccaactcctggtgcgttgagt
gctcctacacctggtgcctactcagcaccgactcccgctgccatcagcgcacctacacca
ggagcttcatggcaaggtggatggggagcagactcggctcctactcctgcggctggtgct
cccacgcctggttattatggtgctcctacgccggcagcatatgctcccccggagactccc
gccgccactggtcctcgatacactgatgacgattga
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