Fructilactobacillus vespulae: R4B61_03325
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Entry
R4B61_03325 CDS
T11124
Name
(GenBank) helicase C-terminal domain-containing protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
fvs Fructilactobacillus vespulae
Pathway
fvs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fvs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
R4B61_03325
09124 Replication and repair
03420 Nucleotide excision repair
R4B61_03325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fvs03021
]
R4B61_03325
03036 Chromosome and associated proteins [BR:
fvs03036
]
R4B61_03325
03400 DNA repair and recombination proteins [BR:
fvs03400
]
R4B61_03325
Enzymes [BR:
fvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
R4B61_03325
Transcription machinery [BR:
fvs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
R4B61_03325
Chromosome and associated proteins [BR:
fvs03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
R4B61_03325
DNA repair and recombination proteins [BR:
fvs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
R4B61_03325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
PDDEXK_1
ResIII
TPR_NOC4
Helicase_C
Utp13
PhoH
Motif
Other DBs
NCBI-ProteinID:
XNW45335
LinkDB
All DBs
Position
complement(721715..724057)
Genome browser
AA seq
780 aa
AA seq
DB search
MNQIGVRDLVSFILRSGDLNTNSNSTNTAQAGTRIHHKIQKQHGKDYQSEYYLEKTIQKN
NHEFQVHGRADGVILKNNHATIEEIKTSDTEFPDLSKNRLQLYWGQVKVYAYLLMNEHPE
LERVDLDLVYVQTPEEIITKTSSSITKTEATTFFNQLVDEYQEWLEMQEAFTKERILTAQ
RLPFPFPAYRKGQRELAKIVYKSVMYQKHLFVEAPTGTGKTISTLFPAIKAMGLELTSRI
FYLTAKQSTRRVAEEALQLLSEKGLVLHSITLTAKDKIRFKEEEDVRPEDNPYMIGYYDR
LKPALKDLLTHENQITRSVIEDYAKKYSVDPFEFSLDASLFCDVIIGDYNYLFDPRVHLT
RFFEVENSDNFFLIDEAHNLVNRSREMYSTEINSAPIRPLIKLLQAKPEKNKPVLTKLKS
LNRYFNKLAKEMKTNKQTSLTESEENEKLTKLVNNLIKVLRKWLAKEKPSTETDQVLDYF
FECIGYQKINEFFGPNYKLRTLLTERGITVRLFCIDPSPFLADSLKLGGGAVLFSATLSP
MDYYQNVLGDEPDSLKYQTASPFPAKNQKLLITSYVDTRYQQRQASLVKIVQSIKTLIEQ
KDGNYLIFAPSYQYLEMVVTAFHNAYPEIEIVTQTNQMNDEERQNFLAKFNDPQEHPIVG
FALLGGIFSEGIDLVGDKLIGVGIIGVGLPGLNQETNLIRDYFDKQNGHGFQYAYQLPGL
NNVFQAAGRLIRGNNDKGIILLMDNRFLNKNYNVFFPKTWYTNTVVHNLNELKNKIKEFW
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaattggagtccgcgacctagtgagctttatcttacgaagtggtgatttaaac
accaactcaaatagcactaacaccgcccaggccggtactagaattcatcataaaattcaa
aagcagcacggaaaagattaccaatccgaatactatttagaaaaaaccatccaaaaaaat
aaccatgaatttcaagtccacggtcgtgcggacggcgtaattttaaaaaataaccatgcc
actattgaagaaattaaaacatctgacacagagttccctgacctttctaagaatcgtttg
caactctactggggtcaggtaaaagtttatgcctacctcttgatgaatgagcatcctgaa
ctagaacgcgttgatctagacctcgtctatgttcaaactccagaagagattatcactaaa
accagttcttccattacgaaaacggaagcaaccaccttttttaaccagttagttgatgaa
tatcaagaatggttagaaatgcaagaagcgttcactaaagagcggattctcactgctcaa
cgactcccttttccgtttccagcttatcggaagggccaacgtgaactagctaaaatcgtc
tacaaatcagtaatgtatcaaaaacatctctttgtggaggcgcctacgggaactggaaaa
acaatctccaccctttttccagcaattaaagccatgggactggaacttaccagtcggatt
ttttatctaaccgctaaacaaagtactcgacgagtggccgaagaagcactccaactgctc
agtgaaaaggggctagtccttcacagcattaccctaaccgccaaggataaaattcgcttc
aaagaagaagaggatgttcgtcctgaagataatccatacatgattggatactatgaccgg
ctaaagcccgcactaaaggatttactgactcatgaaaaccaaattactcgcagcgtgatt
gaagattatgccaaaaagtattccgtcgatccgtttgaattttctctggatgcgagcctt
ttttgtgatgtcatcattggtgactataactatctgtttgatccacgagttcatctaact
cgtttttttgaggtggaaaattcggataacttctttttaattgatgaagctcataacctg
gttaatcgttcacgtgagatgtattccactgaaattaattccgctcccatccgtccctta
atcaagttattacaagcaaagcccgagaaaaacaaaccggtcctcaccaaactaaaaagt
ttaaaccgctactttaataaacttgccaaagagatgaagactaacaagcaaacttccctc
accgaaagtgaagaaaacgaaaagctcactaagttagttaataacttgattaaggtgctc
agaaaatggctggccaaggaaaaaccgtcaacagaaaccgatcaggtcttggactacttt
tttgaatgtattggctaccaaaaaatcaacgaattctttggacctaactataagctcaga
acccttctaacagaacggggaattaccgtgcgcctattctgcatcgatcctagtcccttt
ttagccgatagccttaaacttggtggtggcgcggttcttttctctgccaccctttctcca
atggattactatcaaaacgttttaggcgatgaacccgacagtctaaagtatcaaaccgca
tcgccgtttccggctaaaaaccaaaagttgttaattacttcctacgttgatactcgttac
caacaacgccaggccagccttgttaagattgtgcagtcaattaaaactttaattgaacaa
aaagatggtaactacctgatctttgccccgtcctatcaatatttagagatggtggtaact
gcctttcataacgcttatccagaaattgaaatagttacccaaaccaatcagatgaatgat
gaagaacggcaaaactttcttgctaaatttaatgatcctcaagaacatcccattgtcgga
tttgctcttttaggtggaattttttctgaaggaattgatctggtcggcgataaattaatt
ggagtgggcattattggggtcggtctccccggacttaatcaggaaactaacctaattcgt
gattattttgataaacaaaatggacatggctttcaatatgcctaccaacttcccggtctg
aacaatgtttttcaggcagctggtcgtctaattcgtggaaataacgacaaaggaattatt
ttattaatggataaccgatttcttaataaaaactataatgttttctttccaaaaacgtgg
tacactaacactgtggtgcacaacctaaatgaattaaaaaacaaaattaaagaattttgg
taa
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