Fructilactobacillus vespulae: R4B61_03950
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Entry
R4B61_03950 CDS
T11124
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fvs Fructilactobacillus vespulae
Pathway
fvs03420
Nucleotide excision repair
fvs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R4B61_03950 (pcrA)
03430 Mismatch repair
R4B61_03950 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fvs03400
]
R4B61_03950 (pcrA)
Enzymes [BR:
fvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R4B61_03950 (pcrA)
DNA repair and recombination proteins [BR:
fvs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R4B61_03950 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
R4B61_03950 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
XNW44104
LinkDB
All DBs
Position
828813..831068
Genome browser
AA seq
751 aa
AA seq
DB search
MAIANLLDSMNDKQREAVEQTEGPLLVMAGAGSGKTRVLTHRIAYLIEDEKVMPWNILAI
TFTNKAAREMKERVNKLLEVGGNDVWVSTFHALGVRILRRNIEKLGYNQAFSIVGSSEQK
TLVKRILSDMNLDPKQNDPRAILGAISNAKNNLETPAEYHKNHNDNNPFHQVTDLVYEEY
QKRLKQNDSVDFDDLIMLTIRLFEQFPDVLSYYQNKFHYIHVDEYQDTNEAQYQLVSMLA
DKYENICVVGDADQSIYGWRGANMSNILNFENDYPNAHLVMLEQNYRSTKTILDAANGVI
QNNSERKDKNLWTENNQGEKITYYRAQSERDEAQYIVAKVKKEMADNHYSFDDFAVLYRT
NAQSRVIEETFLKSNIPYNIVGGHKFYERKEIKDILSYLTLAGNPNDSLSFERVINVPKR
GIGPTSFEKLRQFAFDSQLGLLEAALNVEMANQISARARNAIANFGDVIAQIRNNIEEKT
VTEVTNDILDKSGYLNELKKQESLEAQARIENIEEFLSVTKNFDDKYEPTDSETGNRLVD
FLADLALVSAQDDVDEDAQQVTLMTLHAAKGLEFPVVFMPGMEDNIFPLSRAKEKPEELE
EERRLAYVGITRAQVKLYLTNTFSRMLYGRLQNNPVSQFIEEIKPELLTSDNVKAAGNRK
SLGRQSDANRSLNRAFATSYQQPVMPKKPQGTGADKKSWTVGTKVTHKAWGEGTVVKING
TGEDMELDIAFPEKGIKRLLAAFAPIKKVEE
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggcaattgcaaacctgttagatagtatgaacgataagcaaagagaggcagttgaacaa
actgaaggtcctcttttagtaatggcaggtgcaggtagtggaaagacgagagttttaacc
caccgaattgcctacttgattgaagatgaaaaggtgatgccttggaacatcttagcaatc
acttttacgaataaggccgcccgcgaaatgaaagagcgagttaataagttgctagaagtc
ggtggcaatgatgtttgggtctccacttttcatgctttgggagtgcgaatcttacgaaga
aacattgaaaaactaggttataatcaagctttttcaattgtgggttctagtgaacaaaaa
acattagttaagcgaattttgagtgacatgaatttggatccaaaacaaaatgatccacgg
gctattttaggagcaatttctaatgcgaaaaacaacttagagactcctgctgagtatcat
aaaaatcacaatgataataatccatttcatcaagtaactgacttagtttatgaggaatac
caaaaacgattaaaacaaaacgattcagttgattttgatgatttaattatgcttaccatt
cgactatttgaacaatttccggatgtcttaagctactatcaaaataaatttcactacatt
catgtggatgaataccaagatactaatgaggcacaatatcaacttgttagtatgctagcc
gataaatatgaaaatatttgtgtggttggtgatgccgatcaaagtatttatggttggcgt
ggtgcaaatatgagcaatattttaaatttcgaaaatgattatcctaatgcacatttagta
atgttggaacaaaattatcgttctactaaaacgattcttgatgcagctaatggtgtaatt
caaaataatagcgaacgaaaagataaaaacttatggacagagaataaccaaggggaaaag
attacctattatcgcgctcaaagtgaacgagatgaagcgcaatacattgttgcaaaagtg
aaaaaggaaatggctgacaatcactattcttttgatgactttgctgtcttatatcgaact
aatgcccaatcacgtgtgattgaagaaacgtttttgaaatctaatattccttacaacatc
gtgggaggtcataaattctacgaacgaaaagaaattaaagatatcctttcttacctaacg
cttgccggtaatccaaacgattcattgagttttgagcgggtaattaacgttcccaaacgg
ggcattggtcctactagttttgaaaagctacgtcaatttgcctttgatagtcaattagga
ctactagaagcggctttaaacgtggaaatggctaaccaaatttcagcgcgggctcgcaat
gcaattgctaattttggtgatgtaatcgcacaaattagaaataacattgaggaaaaaacg
gtaactgaagtaactaatgatattttggataaatccggttacctcaatgaattaaaaaaa
caagaatcgctagaagcacaggcacgaattgaaaatatcgaagaattcctttcagtaacc
aaaaatttcgatgataagtatgaacccactgatagcgaaacgggcaatcgtttggttgac
tttttagcagacttagcgctggtttctgcccaagatgatgttgatgaagatgctcagcaa
gttactttgatgacccttcatgcggctaagggattagaatttccagtggtatttatgccg
gggatggaagataatattttcccattatcacgagcaaaggaaaaaccagaagaattagaa
gaagaacggcgtttggcctacgtgggaatcaccagagcccaggtcaaactctatttaacc
aataccttttcacggatgctttatggacgtttgcaaaataatccagtatctcaatttatt
gaagagattaagccagaattgttaaccagtgataatgtcaaggcagctggtaatcggaaa
tcattaggaagacaaagtgatgctaaccgcagcttgaatcgggcgtttgcaacttcatat
caacaaccagttatgcctaagaaaccacaaggaacgggtgctgataaaaagtcttggaca
gtgggaactaaggtgacccataaagcttggggtgaaggtacagtagttaaaattaatgga
actggtgaagacatggaattagatattgcctttccagaaaaaggaattaaaagattattg
gcggcatttgccccaattaaaaaagtcgaagagtag
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