Fructilactobacillus vespulae: R4B61_04575
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Entry
R4B61_04575 CDS
T11124
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
fvs Fructilactobacillus vespulae
Pathway
fvs03030
DNA replication
fvs03430
Mismatch repair
fvs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R4B61_04575 (holA)
03430 Mismatch repair
R4B61_04575 (holA)
03440 Homologous recombination
R4B61_04575 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fvs03032
]
R4B61_04575 (holA)
03400 DNA repair and recombination proteins [BR:
fvs03400
]
R4B61_04575 (holA)
Enzymes [BR:
fvs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R4B61_04575 (holA)
DNA replication proteins [BR:
fvs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R4B61_04575 (holA)
DNA repair and recombination proteins [BR:
fvs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R4B61_04575 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
DNA_pol3_delt_C
DUF6134
Motif
Other DBs
NCBI-ProteinID:
XNW44199
LinkDB
All DBs
Position
939496..940524
Genome browser
AA seq
342 aa
AA seq
DB search
MSINEEIETIAKKTKPIYLITGTNDYFENEIRKQIKKLIPKEDQMMNYAEYDMDNTSLAT
ALDDALSVPFFGDRRVVIIKNAMFLTGSNPKGKLKHNPDELVSYLEHVPVETVLFIFVPA
EKLDGRKNVVKKLKQKSTLLELESVSEQEISKIVKDKVASSGYQIETDALNELFSRTLGD
LALIINELDKVFIYCKDSKVIEKDTIDKLVSKSLDQNVFGLVDDVVSGRVTKAIQFYGQL
LEQKQEPIQINAILESQFRLLLQVKILAQHSYSPSMMTKELKVHPYRIKLANQSAKKFTI
DYLQAAYLELVEIESKLKSSTDDPELLFEIFAIKFNNKKNSV
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattaatgaagaaattgaaacaattgctaaaaaaaccaaaccaatctacctaata
acaggaactaatgattattttgaaaacgagattcgaaaacaaattaaaaagttgattcct
aaagaagatcaaatgatgaattatgctgaatatgatatggataacactagtttggcgact
gcattagatgatgcactttcagttcctttttttggagatcgtagagtagtaataattaaa
aatgcaatgtttttgacagggagtaacccgaaagggaagttaaaacataatcctgatgaa
ttagttagttatttagagcatgttccggttgaaacggttttatttatctttgttccggct
gaaaaattagatggtcgaaagaacgttgtaaaaaaattaaagcaaaagagtacattgtta
gaactagaaagtgtatctgaacaagaaattagtaaaattgtgaaagataaggttgctagt
agtggatatcagattgaaacggatgcattgaatgagttgttttcccgtactttgggtgat
ttagctttaattattaatgaactagataaagtgtttatttattgcaaagatagcaaggta
attgaaaaagatacaattgataaattagtttctaagtcgttagatcaaaatgtttttggt
ttagtcgatgatgttgtttcaggaagggtaactaaagcaattcaattttatggtcagtta
ttggaacaaaaacaggaaccgattcaaattaatgctattttagaaagtcaatttaggctg
ttattgcaagttaagatattagcacaacatagttacagtccatcgatgatgactaaggaa
ttaaaagttcatccctatagaattaaattagccaatcaatctgcaaaaaagtttacgatt
gattacctgcaggctgcttatttggaactagtagaaattgagagcaaactaaaaagcagt
actgacgatccagaactactttttgaaatatttgcaattaaatttaataataaaaaaaac
tcagtttaa
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