Fructilactobacillus vespulae: R4B61_04865
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Entry
R4B61_04865 CDS
T11124
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
fvs Fructilactobacillus vespulae
Brite
KEGG Orthology (KO) [BR:
fvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvs03019
]
R4B61_04865
03009 Ribosome biogenesis [BR:
fvs03009
]
R4B61_04865
Enzymes [BR:
fvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
R4B61_04865
Messenger RNA biogenesis [BR:
fvs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
R4B61_04865
Ribosome biogenesis [BR:
fvs03009
]
Prokaryotic type
rRNA helicases
R4B61_04865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
XNW44253
LinkDB
All DBs
Position
1000350..1001708
Genome browser
AA seq
452 aa
AA seq
DB search
MSSFNDYNFKPFIQAAIKDLGFKKPTPIQSKVIPTIKHGKSVIGKSATGSGKTHAFLLPL
FNNLDVNNNSTQIVITTPSRELAYQIYENVKQIVKFSEQPIRIANYVGGTDKERQINKLK
KEQPQVVVGTPGRILDLFKNGDLDINTANQLVIDEADMTLDFGFLETVDKIAAAMAQDLQ
MMVFSATIPPKLQPFLKKYMKNPVFDDIPTETVINQNVDNWLISTKGNDKNSLIYQLLTM
GNPYLALIFANTRERVDEIEAYLQGQGLKVAKIHGGMQPRVRKRVMKQIQNLDFQYVVAS
DLAARGIDIDGVSHIINDDIPSDNEYFVHRVGRTGRGGMSGIAITLYGPDEDQKIQALEN
MGINFKPKEIKHGDVVDSYDRRRRQKYKGHHDKLDGSTLGMINKKKKNVKPGYKKKIKRA
IKVKEDQNRKIEVRSQIRARKKQKKRSSERYQ
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatttaacgattacaattttaagccgtttatccaagcggcaattaaggactta
ggttttaaaaagccaacaccaattcaatctaaagtgattccaacgattaaacacggaaaa
agtgtgattgggaagtcggccactggtagtggaaagacccacgcttttttacttccgcta
tttaataatttagatgtgaataataatagtacccaaatcgtaattacgacccctagtcga
gaattggcttatcaaatttatgagaatgtaaaacaaattgtaaaatttagtgaacaacca
attcgaattgctaattatgttgggggaactgataaagaacgacaaattaacaagttgaaa
aaggaacaaccccaagtagtggtaggaacaccaggtcgaatcttagacttgtttaaaaat
ggtgatcttgatattaatactgctaatcaattagtaattgatgaagcagatatgacgctt
gattttggtttcttagaaacggttgataaaattgcggcggcgatggcgcaagacctacaa
atgatggtcttttcagcaaccatcccacctaaattgcaaccattccttaaaaaatacatg
aaaaacccagtttttgatgatatccccacagaaacggttatcaatcaaaacgttgataac
tggttgatttccactaaaggaaacgataaaaatagtttgatttatcaattattaacgatg
ggaaatccatacttagcattgatatttgctaacactagagaacgagtggatgaaattgaa
gcttacctacaaggacaaggattaaaagttgctaaaattcatggtggaatgcaacctcga
gttcgaaaacgagtgatgaagcaaatccaaaatctagattttcaatacgtagtggcatct
gatttagctgcacgtggaattgatattgatggagtttctcatattatcaatgatgatatt
ccaagcgataacgaatactttgttcatcgagttggaagaactggccgtggtggaatgagt
ggaattgcaatcaccctttatggcccagatgaagatcaaaagattcaagctttagaaaac
atgggaattaactttaaacctaaagaaatcaagcatggtgatgtggttgattcctatgat
cgtcgtcggagacaaaagtataagggtcatcatgataagttagatggatcaacgctcgga
atgattaacaagaagaagaaaaacgttaaaccgggttataaaaagaaaattaaacgagca
attaaagttaaagaggatcagaatcgtaagattgaggttcgtagtcaaattagagcgcga
aagaaacaaaagaaacgtagttcagaacgttatcaataa
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