Candidatus Formimonas warabiya: DCMF_02300
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Entry
DCMF_02300 CDS
T07208
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa03030
DNA replication
fwa03410
Base excision repair
fwa03420
Nucleotide excision repair
fwa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DCMF_02300
03410 Base excision repair
DCMF_02300
03420 Nucleotide excision repair
DCMF_02300
03440 Homologous recombination
DCMF_02300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fwa03032
]
DCMF_02300
03400 DNA repair and recombination proteins [BR:
fwa03400
]
DCMF_02300
Enzymes [BR:
fwa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DCMF_02300
DNA replication proteins [BR:
fwa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DCMF_02300
DNA repair and recombination proteins [BR:
fwa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DCMF_02300
NER (nucleotide excision repair)
GGR (global genome repair) factors
DCMF_02300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DUF6519
HHH_2
Taq-exonuc
MIER1_3_C
DUF3913
Motif
Other DBs
NCBI-ProteinID:
ATW28309
UniProt:
A0A3G1L102
LinkDB
All DBs
Position
524641..527214
Genome browser
AA seq
857 aa
AA seq
DB search
MLTNGEGEFTNAAYGFTTMFSKILAEEKPDWVVVCFDKGKITFRTEQYQEYKGHRKATPP
ELRPQFPLIKKILTAMNVAFEEKEGFEADDLIGTFVRQGEKEDVINLVLTGDKDALQLVS
PKSVVLLTRKGISELERYDEKAVSDRFGLAPEQIIDLKGLMGDSSDNIPGVPGIGEKTAL
KLLQQFQTVENIYLHLNEISPKLRDKLTENQNLAILSKGLATIECCVPIEIDFNRLKYEE
PDYEQLLGLYKGLEFKSLIKGILEKMATRETPPVLQENGEGEANFHRLAAPEEISRTVQE
VLETGKAAIYVTHRGNYFDGDISSISFAVSESKAYTVFFDGDRDREKLMSLKELFATENI
EKVVYNAKDLQVMLFQAGQELQGVCADVMLGAYLLNPGSSEYSLESLCLEYLNRALVTRE
DEVLDHCGRAQVVWQLAGIIEQKIADQGMKDLYDQVELPLESVLAEMEIAGVKVESSQLK
NMSQELEAAVQHISREIFELAGEEFNINSPKQLGVILFEKLGLPPVKKTKTGFSTNAEVL
DQLAPRHEIVAKILEHRTLVKLKSTYVDGMQILINAKTGKLHTSFNQTVTATGRLSSTEP
NLQNIPIRMEMGRQIRKVFVPSREGNILLAGDYSQIELRVLAHISGDPVLKEAFQQDQDI
HTRTAAEVFGVPMDAVTSEMRRRAKAVNFGIVYGISDYGLSRDLGITRKEAKRYIDSYFA
RYPGVADYLDRVVREARDKGYVTTLLNRRRYLPDIYSSNFNVRSFGERTAMNTPIQGSAA
DIIKVAMIRLSRYLHDQGSRSQMILQVHDELIFDVVPDEIDTLAKTVKELMENAVPLDVP
IKVDLKRGEDWYHMTKI
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
ttgctgacaaacggggaaggggaatttaccaatgccgcctacggttttaccaccatgttt
tctaaaatattggcagaggagaagccggactgggtcgtggtgtgctttgataaggggaag
atcacctttcgtacagaacagtatcaagagtataaggggcaccgtaaggccactccgccc
gaattgcgtccccagtttccattaattaaaaagatattgacggccatgaacgtggccttt
gaagaaaaggaaggctttgaggcggacgatttgatcggaacttttgtccggcagggggaa
aaagaagatgtgataaatctagttttgaccggagataaggatgccctgcaattggtttct
cccaagtcggtggtattattgacccgcaaaggtatttccgagctggagcgctatgatgaa
aaagccgtatccgaccggtttggacttgctccggagcaaattatagacctcaagggtttg
atgggggattcctccgataacatccccggagttcccggcatcggagaaaaaaccgccctg
aagttgctgcagcagtttcaaacagtggaaaatatttatctccaccttaacgaaatctcc
cccaagctgcgggataaactgacggaaaatcaaaatttggcgattttgtcgaaagggctg
gctaccatcgaatgctgtgttcctatcgaaatcgactttaacaggctgaagtatgaagag
ccggattatgaacagcttttaggcctgtataaagggttggaatttaaaagcttgatcaaa
ggaattttggaaaagatggctacccgggaaacgcctccggtcctgcaggaaaacggagaa
ggtgaggctaactttcaccgtctggccgctccggaagagatttcccgtacagtccaagag
gttttggagacgggaaaggccgcgatctatgtaacgcaccgggggaattactttgacggc
gatatttcctcgatctcttttgccgtgtccgaaagcaaggcatataccgtattctttgac
ggcgaccgggaccgggaaaaactgatgtctctgaaagaactctttgcgacggaaaatata
gaaaaagtagtttataatgccaaagaccttcaagtaatgctttttcaagcagggcaagaa
ctacaaggggtttgtgccgatgtgatgctgggggcctatctcttgaatcccggttcctca
gagtacagcctggagtctttatgcctggagtatctgaaccgggccttggtgacccgggaa
gacgaagttttggaccactgcggccgggcccaagtggtgtggcagttagcgggtatcatt
gagcaaaagattgcggatcaagggatgaaagatttgtacgaccaggtggaactccctttg
gaaagcgtattggcggagatggaaatagcgggagtaaaagtggaatcatctcaattgaaa
aatatgtctcaggaattggaagcagccgtgcagcacatcagccgggagatatttgaactg
gccggagaagagtttaatatcaattcacccaaacaattaggggtgatcctttttgaaaaa
ttgggtttgcccccggtgaaaaagacaaaaacaggttttagtaccaatgcggaggttctg
gaccaattggctccccggcatgaaatcgtggctaaaattttagaacaccggaccctggta
aaactgaaatccacttatgtggacggcatgcaaatactgattaatgccaagacgggaaag
ctgcatacttcctttaatcagacggttaccgctacggggcggctttcttccacggaaccc
aatctgcagaatattcccatccgcatggagatggggcggcaaattcgcaaggtctttgtt
ccatcacgggagggaaatattcttctggcgggagattattctcagatcgaattaagggtg
ctggcccatatttccggtgatccggtactgaaagaagcttttcagcaggatcaggacatt
catacccgaacggctgcggaggtttttggggtgcccatggatgcggtcacaagtgaaatg
agaagaagagccaaggcggttaactttggcatcgtctatggaatcagtgattatggcttg
tccagggacttgggcattacccgtaaggaagcaaagcgttatattgacagttattttgcc
cgttatccgggtgtagcggattatttggaccgggtggtacgtgaggcgcgggataaagga
tatgtgacgactttactcaatcgccggcgttatcttcccgacatctatagttccaatttt
aacgtcaggagttttggcgaaagaactgccatgaacacgccgattcagggaagcgccgcc
gatattatcaaggttgctatgatccggttatcccgctatcttcatgatcagggcagccgg
tcccaaatgattcttcaggtgcacgatgagctgatttttgatgtggtcccggatgaaatc
gataccctggcgaaaacggtgaaagagttaatggaaaacgccgtgccgctggatgttcct
ataaaagtggatttaaaaaggggagaagattggtaccatatgacgaagatttag
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