Candidatus Formimonas warabiya: DCMF_03050
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Entry
DCMF_03050 CDS
T07208
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa00061
Fatty acid biosynthesis
fwa00071
Fatty acid degradation
fwa01100
Metabolic pathways
fwa01212
Fatty acid metabolism
fwa02024
Quorum sensing
fwa04146
Peroxisome
Module
fwa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DCMF_03050
00071 Fatty acid degradation
DCMF_03050
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DCMF_03050
09145 Cellular community - prokaryotes
02024 Quorum sensing
DCMF_03050
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
fwa01004
]
DCMF_03050
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fwa04147
]
DCMF_03050
Enzymes [BR:
fwa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DCMF_03050
Lipid biosynthesis proteins [BR:
fwa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
DCMF_03050
Exosome [BR:
fwa04147
]
Exosomal proteins
Exosomal proteins of breast milk
DCMF_03050
Exosomal proteins of breast cancer cells
DCMF_03050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ATW23909
UniProt:
A0A3G1KN71
LinkDB
All DBs
Position
complement(681033..682556)
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AA seq
507 aa
AA seq
DB search
MSVDLFLRNTAARLPDKKAIFFGDTEITYGQFDQEVDNLAQGFIDLGLGYQQRVSLLLAN
SPDFIRAYFAITRAGGTVIPLNPLFKGEEIKYILNDAEVVFLITTQAFLPLVESVWGQIP
ALKKIIVIGGESDEDVISWDDLISIPSAPVKVAINPEDIAACLYTSGTTGKPKGALLSHS
NLMFDAAAVVNHVEMNPKDNHLCVLPLFHSYAQMAAMLCPIYSGGSITVMAQFRPDHVLK
EIGKHKVTLFCGVPAMYAAILQNSGNTNEIDLSSLRLCFSGGAPMPLEIMHLFEDEYGII
VIEGNGPTETSPVSYANPMSLRKPGSVGTPLEGVKVKIVNENDQELPPEEIGEICVQGPN
VMKGYLNQPEATAEAIKDGWFHTGDLGKKDADGYIYIVDRKKDMLIVSGLNVYPREVEEC
LYQHPKVAEAAVIGIHDSLRGEVPKAFIVLKPGETAVPKEFSVFCRERLANFKCPRQVQL
LESIPKTATGKIDKKQLREAESMGLYK
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtagatctttttttacgaaacacggccgcccgtcttccagacaaaaaagcgatt
ttttttggggataccgaaattacttacggtcagtttgatcaagaagtggacaaccttgcc
cagggctttatcgatcttggcttagggtaccaacagcgggtgagccttctcctcgcaaac
tcaccggattttatcagagcttattttgccattacccgggccggcgggacagttattcct
ttaaaccctctttttaaaggggaggaaattaaatatattttaaatgatgccgaagtggtt
tttctcatcacgacccaagcatttttgcctttagtggaaagcgtttggggtcaaattccc
gcgctgaaaaaaatcatcgtcatcggcggagaatccgatgaggatgtaatctcttgggat
gatttgatctcgataccatccgcacccgtcaaagttgccatcaacccggaggatattgcc
gcctgtctttatacatcaggcacaacgggaaagccgaaaggagccttactctcacatagc
aatttaatgtttgatgcggctgctgtggtaaaccatgtagaaatgaacccgaaggacaac
catttgtgtgtccttcccttgtttcattcttatgcgcaaatggcggccatgctctgtcct
atttattccggaggaagcattaccgtaatggcccagtttcggccggatcacgtactgaag
gaaatcggcaaacacaaagtgacccttttttgcggggttcccgccatgtatgctgccatc
ctgcaaaactccggaaacacaaatgaaattgatctttcctctttgcgcctgtgtttttct
ggcggagcaccgatgcccttagaaatcatgcatctttttgaggatgaatacggtatcatt
gtgattgaaggaaacggccctacagaaacctctcctgtctcctatgccaaccccatgagc
ctgcggaagcccggttctgtggggacacctttagaaggagtcaaggtgaagattgtaaat
gaaaatgaccaggaactgcctccggaagaaattggagaaatctgtgtgcaaggccccaac
gtcatgaaaggctatctcaaccagccggaagccaccgcggaggctatcaaagatggctgg
ttccacaccggcgacctgggcaaaaaagatgccgacggttacatttacatcgtcgaccgg
aagaaggacatgttgattgtcagcggactcaacgtatatcccagagaagttgaagaatgc
ctgtaccaacatcccaaggttgcagaggcagcggtaatcggcattcatgatagtctaaga
ggtgaagtgcctaaggcctttattgttttaaaacctggtgaaacggcagtaccgaaagaa
ttctccgtcttttgccgtgagagattggctaactttaaatgtccccgccaagtgcaactg
ctcgagagtattcctaaaaccgctacaggaaagattgacaaaaagcagcttcgggaagca
gaaagtatgggcttgtataaataa
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