Candidatus Formimonas warabiya: DCMF_03180
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Entry
DCMF_03180 CDS
T07208
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DCMF_03180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fwa03400
]
DCMF_03180
DNA repair and recombination proteins [BR:
fwa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
DCMF_03180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
AAA_22
Exonuc_VII_L
Competence
MPS2
Motif
Other DBs
NCBI-ProteinID:
ATW23932
UniProt:
A0A3G1KN89
LinkDB
All DBs
Position
710437..712818
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AA seq
793 aa
AA seq
DB search
MRERENAVDEKTLGKIEFDKISQMLDECCGSVLGKENAHRLAPGKDLHQIRSWLQETTEA
KEIMRFNPSFSLGGIRDIRSNVERAALGAILEPEDLLDIADTCRAARKTKTFFSNLKGSY
PLVMDLAKNLGLFKSMETAINEAVSDEGMILDTASDQLFVIRKKIRTYQERIKDKLDSLI
KSPHIAKYLQDNLVTIRADRYVIPVKQEYRAQIPGLIHDQSASGATLFIEPMVVLEMNNE
LKKLKAAEHQEIILILKGLSQQVASFDQDLASTLRVLGRLDFIFAKARLSQIMDAGPPEI
NTFGAIKLVRARHPLIKGNVVPIDVDLGKNLDAMIITGPNTGGKTVTLKTIGLLHAMALS
GLHVPANTGTEVCLFLNIFADIGDEQSIEQSLSTFSSHLVNIVRILTQSDEHALVLLDEL
GAGTDPTEGAALAMAILDYLQKRHVKVVATTHYSELKAFAYNSPRIVNASVEFDVKTLQP
TYRLLMGVPGKSNAFEIARRLGLREDVINRASEFLTKDQVQVADLIANLEMDQRISEQER
KEAETLRKELQAMERRLEDKETELHNREREIMRRAQEESLQVVRKTKEEMDRLYQELKTN
LDAEAQKAQNKALTGAKEKIKGMEDKIYQALPEQKYTGKAPQTVMPGQLVEIPRLNQTGH
VLSAPNQSGEVYVQAGIMKIAVKLDDLRLPISTEKKSGETRVGHLRMEKIRQVSPELDLR
GMIVEEALEQMDKYLDDVFVAGLKEIRIIHGKGTGALREAITSHLKKHRQVKGFRLGDYN
EGGTGVTLVSLNV
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgagggagagggagaatgctgtggatgaaaagacattagggaaaatagaatttgataaa
atcagccagatgctggatgaatgctgcggctctgttctggggaaggagaatgcgcaccgc
ttggctcccgggaaggatttgcatcagatccgttcttggcttcaggagacgacagaggct
aaagaaattatgcggttcaatccatccttcagtctgggcggcattcgggatatccggagc
aatgtggaaagagcggcattgggagcgatattggaaccggaagatttattagatattgct
gatacctgccgtgccgcgagaaaaacaaaaacttttttttccaacttaaaaggcagttat
cccctcgtgatggatttggcgaaaaatttgggcctgtttaagtctatggaaacagccatc
aatgaggcggtaagcgatgaagggatgattctggatacggccagcgatcaactctttgtg
atcaggaaaaaaatcaggacttatcaggaaaggatcaaagataagctggattccctgatc
aaaagcccccatattgccaaatatctgcaagacaatttggtgacgatccgggccgaccgt
tatgtgatccctgtgaaacaagagtaccgggcccagatccccggattgattcatgaccag
tcggccagtggggcgacactttttattgaaccgatggttgtattggaaatgaataatgaa
ttgaagaaactgaaagccgcggaacatcaggagattatccttattttaaaaggtctcagc
cagcaggtggcttcttttgaccaggacctggccagtaccttacgggtacttggccggctg
gattttatttttgccaaagcacgattaagtcaaatcatggatgccgggcccccggaaata
aacaccttcggggctattaagctggtccgggcccgccaccccttaatcaagggaaatgta
gtgcccatcgatgtggacctgggcaaaaacttggatgccatgattattacagggccaaat
acagggggaaaaaccgtcacgctgaagacgatcggactgctccatgctatggccttgtcc
ggtcttcatgtaccggcgaacaccggaacggaagtatgtttatttcttaatatttttgca
gatattggtgacgagcagagtatcgaacagtcattaagcactttttcttctcatttggta
aatatcgtacgtattttgacacagtcagacgagcatgcattggtgctgctggatgaactg
ggcgccggcaccgaccctacggaaggcgccgccctagccatggctattttggactatctt
cagaagcggcatgtcaaagtagttgccacaacccactatagcgaattaaaagcctttgcc
tataatagtccgagaatcgtcaatgccagtgtggagtttgatgtcaagaccctccagccc
acataccggcttttgatgggtgtgccgggaaagagcaatgccttcgaaattgcccggcga
cttggattaagggaagatgtgattaaccgggccagtgagtttttgaccaaagatcaggtt
caggtggcagacttgattgctaatttagagatggatcaacggattagcgaacaggaaaga
aaagaagcggaaacattgcgcaaagaactgcaggccatggaacggcgtttggaagataag
gagacggaactgcataaccgggaaagagaaattatgcggcgggcccaggaagaaagttta
caggtggtcaggaaaacaaaagaggaaatggaccggctttatcaggaattgaaaacgaac
ctggatgccgaggcccagaaagcgcagaataaggcattgactggggcaaaggaaaaaatt
aaaggaatggaagacaaaatatatcaagccctgccggaacaaaaatataccggtaaagca
cctcagacagtgatgcccggacaattggtggaaatccccaggttaaatcaaaccggccat
gtcctttccgcacccaaccaatcaggggaagtgtatgttcaggcaggaattatgaagatc
gcagttaagctggacgacctgaggcttcccattagtaccgaaaagaagtcgggagagacc
agagtgggacatttaaggatggaaaaaattcgccaggtttctcccgaactggatctgaga
gggatgatcgtagaagaagcccttgaacagatggacaaatatcttgatgatgtttttgtc
gccggcttaaaagaaatcagaattattcacggaaaaggaactggagcgttgcgggaggcg
atcaccagccatttaaaaaaacaccgtcaggtgaaaggatttcgcttgggagactataat
gaaggtggaacgggtgtaaccctggtaagtttaaatgtgtaa
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