Candidatus Formimonas warabiya: DCMF_03330
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Entry
DCMF_03330 CDS
T07208
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DCMF_03330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fwa03400
]
DCMF_03330
Enzymes [BR:
fwa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
DCMF_03330
DNA repair and recombination proteins [BR:
fwa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DCMF_03330
RecFOR pathway proteins
DCMF_03330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
ATW28321
UniProt:
A0A3G1L0Z9
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All DBs
Position
754934..755374
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AA seq
146 aa
AA seq
DB search
MGNRFRLLDYGCIRTDAGTPLEERLEKIYHGMILLINRWHPEELAIEELFFNKNTRTALT
VGHARGVIFLAAAHQKVPIREYTPLQVKQAVVGYGRADKHQVQYMVKALLNLSSLPKPDD
AADALAIAICHAHWHSVEHTINQKER
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
ctgggaaacagatttcgcctgcttgattacgggtgtatcaggactgacgcaggaacccct
ctggaagagcggttggaaaagatttatcacggcatgatattgctcatcaatcgttggcat
ccggaagagctggctattgaagaacttttttttaacaaaaatacccgaactgctcttacg
gtgggtcatgcccggggggttatttttttagcggcagcccatcaaaaggtaccgatcaga
gaatataccccgttacaggtaaagcaggctgtggtaggatatggacgtgccgataaacac
caagttcaatacatggtaaaagctctccttaatctttcatctcttccgaaaccggatgat
gcggccgatgccctggcgattgccatctgtcatgcgcactggcatagcgtggagcatact
attaatcaaaaggagagataa
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