Candidatus Formimonas warabiya: DCMF_03340
Help
Entry
DCMF_03340 CDS
T07208
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DCMF_03340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fwa03400
]
DCMF_03340
Enzymes [BR:
fwa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DCMF_03340
DNA repair and recombination proteins [BR:
fwa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DCMF_03340
RecFOR pathway proteins
DCMF_03340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_16
AAA_22
AAA_14
RNA_helicase
DUF815
nSTAND3
NB-ARC
NTPase_1
AAA_3
TIP49
MCM
AAA_18
Bac_DnaA
TsaE
AAA_24
AAA_17
ABC_tran
AAA_33
AAA_28
Parvo_NS1
NPHP3_N
Resolvase
NACHT
KAP_NTPase
Rad17
Sigma54_activ_2
bpMoxR
ATPase_2
RsgA_GTPase
AAA_19
IstB_IS21
AAA_PrkA
AAA_25
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ATW23952
UniProt:
A0A3G1KNA9
LinkDB
All DBs
Position
756002..757057
Genome browser
AA seq
351 aa
AA seq
DB search
MEEERIVSSSMKPEDLDNELSSIRPMTFGEYIGQDKVKNNLEIFIQAATNRGEPLDHVLL
YGPPGLGKTTLANIIANELNVHIRTTSGPAIERPGDLAAILTSLEPKDVLFIDEIHRLNR
TVEEVLYPAMEDYCIDIVIGKGPSARTLRLDLPKFTLVGATTRAGMLSAPLRDRFGVISR
LEYYQEEDLVTIINRAAAILDVRITPEGAAEIARRSRGTPRISNRLLRRIRDYAEIKANR
VITEDVAKSGLTLLEVDPLGLDKIDRKMMLSIIQKFGGGPVGLETIAAAISESSDTVEDV
YEPYLMQLGFLNRTPRGRMATAEAYHYFGISLPKPLENVELQATLFDERKE
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagagagaattgtttcttcgtcaatgaaaccggaggatctggacaatgaatta
tccagcattcgtcccatgacctttggagaatacattggccaggacaaggtaaagaataat
ttagaaatttttattcaggccgcgaccaacaggggtgaacctttggatcatgtgcttttg
tatggtccgcctggcctgggaaaaacgacgctggccaatattattgctaatgaattaaat
gtgcatattcgcaccacatctggcccggccattgaacgtccgggagatctggcggctatt
ttaaccagtttggaaccgaaagatgtgctttttattgatgaaattcaccgcttgaatcgt
acggtagaagaagtgctttatccggccatggaggattactgcattgatattgtgattgga
aaagggcccagcgcccggacccttcggctggatttacccaagtttactttagttggcgcc
accacaagagcgggcatgctctccgcgccgttaagagaccggtttggggtcatttcccgc
ttggaatattatcaagaagaagatttagtaacgattattaatcgggctgccgcgatactg
gatgtgagaattactcctgaaggggcggctgaaattgcccgccggtctagagggacaccc
agaatttccaatcggctgttgcgcaggatcagggattatgcagagatcaaagcaaaccgg
gtcattacagaggacgtggcgaaatccggcttaaccctattagaagtggaccccctgggt
ttggacaagattgaccgaaaaatgatgttaagcatcatccaaaagttcggcggcggaccg
gtaggattagagacgattgcagctgcaatcagtgaatcgtcggacaccgtggaagatgtt
tatgaaccctacttaatgcagttaggttttttgaaccggaccccaagaggacggatggcg
acagcagaagcataccactattttggcatttctcttcccaaacctttggaaaacgttgag
ctgcaagctaccctatttgatgaaaggaaggaataa
DBGET
integrated database retrieval system
