Candidatus Formimonas warabiya: DCMF_03425
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Entry
DCMF_03425 CDS
T07208
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DCMF_03425
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fwa01007
]
DCMF_03425
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fwa03016
]
DCMF_03425
Enzymes [BR:
fwa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
DCMF_03425
Amino acid related enzymes [BR:
fwa01007
]
Aminoacyl-tRNA synthetase
Class II (A)
DCMF_03425
Transfer RNA biogenesis [BR:
fwa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DCMF_03425
Prokaryotic type
DCMF_03425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2d
zf-tcix
zf-UDP
Motif
Other DBs
NCBI-ProteinID:
ATW23967
UniProt:
A0A3G1KNC9
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All DBs
Position
775480..776739
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AA seq
419 aa
AA seq
DB search
MLTTRPRGTNDFLPGETEKWQYVENVLRTICKDFGYQEIRTPIFEHTELFQRGVGETTDI
VEKEMYTFTDKKNRSLTLRPESTASTVRAYLEHKLYALPQPVKLYYIGPMFRYEKPQAGR
FRQFHQFGVEVFGSSDPGLDAEVIGLAMGIYHRLGLRGLEVHMNSVGCPQCRPKHKEMLQ
EFLKKDFASLCPDCRGRYERNPLRILDCKNEKCQEITAYAPTILNCLCPECREHFDKVKH
YMEISGIKYLIDERLVRGLDYYTKTAFEILVNEIGAQSAICGGGRYDGLIDSLGGPPIPG
VGFALGMERIFPALESQGISLALESPLDVFVVTLGDEAGKKGFQILMDLRMEGIKAEKDY
LGRGLKAQMKTADRMKAKYAVIIGENELDRGIGIIRNMETSAQQEMPLDQAVDWIKRQY
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccaccagaccccggggaaccaatgattttttgcccggggaaacggaaaaatgg
cagtacgtggagaatgtattaagaaccatctgtaaagatttcggttatcaggaaatacgg
acgccgatttttgaacatacggaattatttcagcggggtgtaggggaaaccacggacatt
gtggagaaagaaatgtacaccttcacggataagaaaaaccgtagtttaacattacgtccc
gaatctacggcatccaccgtgcgggcttatttggagcataagctatatgcgcttccccag
cctgtaaagctgtattatattgggcccatgttccggtacgaaaaaccccaggccgggaga
ttccgccagttccatcagttcggcgtggaggtctttggttcttctgatccggggcttgat
gcggaagtaattggattggctatgggcatctaccacaggctaggcttaagggggctggaa
gtacatatgaacagtgtgggatgcccccagtgccggcccaagcataaggaaatgctgcag
gagtttttaaaaaaagatttcgcttctttgtgtcctgattgccggggaagatatgaaagg
aatcccctgcgcattctcgactgtaaaaatgagaaatgccaggaaattaccgcctatgct
cccactatcctcaactgtttatgcccggaatgccgggagcattttgacaaggtgaaacat
tacatggagatcagtgggatcaaatatctgattgacgagagactggtccggggcttagat
tactatacgaaaaccgccttcgagatcctggtcaatgaaatcggcgcccaaagcgccatc
tgcggcgggggccgctatgacggcttgatcgattccctgggagggcctcccataccagga
gtaggatttgccctgggcatggaaagaatttttcctgcattagaatcacaagggatcagc
cttgctttagagagtcccctcgatgtatttgtggtgactttaggggacgaggccggtaaa
aaaggtttccaaatcctcatggatttaaggatggaagggattaaggcggaaaaggattat
ttgggacggggcttaaaagcccaaatgaaaacggcggaccggatgaaagccaagtatgcc
gtgatcatcggggaaaatgagttggaccggggcatagggatcattcggaacatggaaaca
tcggcacaacaagagatgccccttgatcaagctgttgattggatcaaaaggcaatattaa
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