Candidatus Formimonas warabiya: DCMF_03520
Help
Entry
DCMF_03520 CDS
T07208
Name
(GenBank) hypothetical protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa00550
Peptidoglycan biosynthesis
fwa01100
Metabolic pathways
fwa01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DCMF_03520
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DCMF_03520
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fwa01011
]
DCMF_03520
Enzymes [BR:
fwa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DCMF_03520
Peptidoglycan biosynthesis and degradation proteins [BR:
fwa01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
DCMF_03520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ATW23981
UniProt:
A0A3G1KNB1
LinkDB
All DBs
Position
793268..794977
Genome browser
AA seq
569 aa
AA seq
DB search
MFLEKKRILAIYFVFLFFFTLLLGRLYQIQFLDGPGYTKQAVAQRQKTLNFVQYPRGEIL
DRNFRPLTNIEQQPCVVIFPIMVKDASRTAEVLSKILALPPGTIRAKIEIEDSASTQVVK
EPFILQANVSEQKNQLIRQADLPGVYVLPLIPRYRPGWPAGHLLGYVGNLNQNEYQKLQE
EEKDYQPSDVIGKNGLEKQYEEFLRGGTSQKVAALVDDRGRHLSGRGFTLLPPVQEKTEE
PHQVITSIDADYQSVVEHALEGHSGAVVVMDVWKGNILAMASSPKYDPYLLEKPEADDAY
LNKAMQNYPPASVFKILIAAAALTEGVVKPEDSFHCQGGITLPSGRIVSCWEKEGHGDIS
FSQALAFSCNPVFVETGLKLGGEKIMAYAKRLGLTDDTIIGYDLPQETHLDFNPAVPGDV
ANASIGENGISLSPVLVAKLISEVANGGLAVTPRLVLKVQDHLGKVVKEYPAPPSFPVLP
GPVAERLKSMLALTVESGTGKSAQVPGIKCAGKTGSSERDEAWFAGFAPADAPRWAVVVF
IHKGTSGGRDAAPIFQKIVSGLAEIEEIL
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtttctagagaaaaaaaggattttggcgatttattttgtctttcttttcttttttacc
ttgctgctgggccgtctttaccaaattcaatttttggatggaccggggtacaccaaacag
gcggtggcacagcgtcagaagaccttaaattttgtgcagtatcctaggggagagatttta
gaccgtaattttcgtcccctgacaaatattgaacaacaaccctgtgtcgtgatttttccc
attatggtgaaggatgcgtcccgcacagcagaagtattgtcaaaaattttagcccttcct
ccgggaacgattcgggcaaaaattgaaatagaagattccgcctccacccaagtggtgaaa
gaaccttttattttacaggcaaatgtttccgagcagaagaaccaattgatcaggcaagcc
gaccttcccggggtctacgttttgcccctgatccccaggtaccgtccagggtggccggcc
ggacatcttctgggctatgtgggtaatttaaatcagaacgaatatcaaaagcttcaggaa
gaagaaaaagattatcaacccagtgacgtgattggcaagaatggattagagaagcagtat
gaggagtttttaagaggaggcaccagccaaaaagtggccgctctggttgatgaccgggga
cgccacttatccgggcggggctttactctccttcctccggtacaagaaaagacagaggag
ccccaccaggtgattaccagtattgacgctgattatcagtccgttgtggaacacgcctta
gaaggccatagcggtgctgtggttgtaatggacgtgtggaagggaaatatcctggccatg
gccagcagtcccaaatacgatccgtatctgttggaaaaaccggaggcagatgacgcctac
ctcaataaggccatgcaaaactatccccctgcttcagtatttaaaattctcattgcggcg
gctgctttgacagaaggggtggtaaagccggaggattcctttcattgccagggcggaatt
acccttccttccgggaggatcgtgtcttgctgggaaaaggaaggtcatggtgacattagc
ttttcccaggctttggctttttcctgcaatccggtctttgtagaaacggggttaaaatta
gggggagaaaagattatggcatatgcaaaacggctaggtctaaccgatgacaccatcatc
ggatatgatcttccccaggaaacccatctggactttaaccctgccgtacctggggatgtg
gcgaatgcctccatcggagaaaacggcatcagtttgagtccggtgcttgtggccaaatta
atttccgaagtcgccaacggcgggttggcggtaactccccggctggtgctaaaagtgcag
gatcatctgggaaaggtcgtgaaagaatatccagcgcccccttcttttccggtcctgccg
gggccggtggcagaaagacttaaatccatgctggcgctgaccgtggaatcagggacaggc
aagtccgctcaagtacccgggatcaaatgcgccggaaaaaccggctcttcagaaagggat
gaggcatggtttgccggctttgcccctgcggatgcccccaggtgggcagtggtagtcttt
attcataaagggacttcgggagggcgggatgcggcaccgatttttcaaaagattgtctcc
gggttggcagagatagaagaaattttataa
DBGET
integrated database retrieval system
