Candidatus Formimonas warabiya: DCMF_03555
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Entry
DCMF_03555 CDS
T07208
Name
(GenBank) type II secretion system protein GspE
KO
K02652
type IV pilus assembly protein PilB
Organism
fwa
Candidatus Formimonas warabiya
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
fwa02044
]
DCMF_03555
02035 Bacterial motility proteins [BR:
fwa02035
]
DCMF_03555
Secretion system [BR:
fwa02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
DCMF_03555
Bacterial motility proteins [BR:
fwa02035
]
Pilus system
Pilus assembly proteins
DCMF_03555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
nSTAND3
AAA_16
AAA_29
AAA_22
AAA_14
AAA_23
ResIII
ABC_tran
cobW
AAA_11
Zeta_toxin
AAA_7
AAA_19
Rad17
AAA_18
ATPase_2
Pox_A32
Motif
Other DBs
NCBI-ProteinID:
ATW23987
UniProt:
A0A3G1KNF4
LinkDB
All DBs
Position
798429..800129
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AA seq
566 aa
AA seq
DB search
MANIKKKLGDLLIESRVINFAQLQEALRVQQQTGDRLGRVLVNLGYVSEQDIANVLEVQL
GITQIKLGNILLLPDTIKLVPDNLIRQHRIVPIKKEGNKLTVAMVDPLNVVILDDLQIAT
GCIIEPVLATEREIESAVQKLFGFQDLINQAVREFEVMPSANVPTFDLDEIPDDLTEEAP
TVRIVNSLFQQAIRERASDIHFEPHAEEFRVRYRIDGVLKDMMILPRQSIASILSRIKIM
GEMDIAEKRIPLDGRIQIKMDRKNIDLRVSTIPTIFGEKAVIRILDKNAVVVKLDQLGFS
PDILEKYRQQVKRSYGMILITGPTGSGKTTTLYSTLNEILSPEKNIITIEDPVEYVIDQI
NQIRVNQKSGLTFATGLRAILRQDPDIIMVGEIRDSETASIAVRAATTGHMVYSTLHTND
AAGALPRLVDMDVEPFLVASSVVAIVAQRLIRVICPICKKPYELPNDTPERRFLGIRDGV
PVTLYRGTGCQQCGSTGYRGRMAIQEMLVMTQQQRKLVLARAPANELRQSAIEQGMVTIT
QDGIQKALIGITTIDEIMRVASTEEL
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacattaagaaaaagctgggagacctgctcattgaaagcagggtcattaatttt
gcccaacttcaagaggccttgcgggtgcagcagcaaaccggcgaccgtttgggccgggtt
ctggtaaatctgggctatgtttcagaacaggatatcgccaatgttttagaagtgcaattg
ggcatcacccaaattaaactgggtaatatcctgctccttcccgacaccatcaaattggtt
ccggacaatctgatccgccagcatcgcattgtaccgatcaaaaaagaaggcaataaattg
acggtggcgatggtggatcccttgaatgtggtgattttagatgatttacaaattgctacg
ggatgcatcattgaaccggttttagctacggaaagagagattgagtccgccgtgcaaaag
ttgttcggctttcaggatttgatcaatcaggccgtccgggaatttgaggtgatgcccagc
gccaacgtgcccacttttgatttggacgaaatccctgatgatttgacggaggaagcacct
acggtacggatcgtgaactccttattccagcaggcgatacgggaacgggccagcgatatt
cattttgagcctcacgcggaagagtttcgggtacgctaccggattgacggcgtactgaag
gatatgatgatcctgcccagacagtctattgcctccattctctccagaatcaaaattatg
ggcgaaatggatattgcggaaaaaaggattcccctggacggaagaattcagattaaaatg
gaccgaaaaaacattgacctgcgggtttccaccattcccaccatctttggggaaaaggcg
gttattcggattctggacaaaaacgctgtggtggttaagctggaccaattgggcttttcc
ccggacatcttggaaaagtatcgccagcaagtaaaacggtcctacggcatgatcctgatt
accggacctaccggttccgggaaaacaaccaccttgtattccaccctgaatgaaattctt
tctccggaaaaaaatatcattaccattgaagatccggtcgaatatgtgattgaccagatt
aatcaaatccgagtcaatcaaaaatccggactgacatttgccaccggtttgcgggctatt
ttgcggcaggatccggatattattatggtgggggaaatccgggacagtgaaacagccagt
attgcggtgcgggcggcgacgacaggccatatggtttacagtacccttcataccaatgat
gcagcgggcgctttgccccggctggtcgacatggacgtggaaccttttttggtcgcatct
tccgttgttgccattgtcgcccagcgtttaatacgtgtgatctgcccgatctgcaaaaaa
ccttacgagttgcccaacgatacgcctgagcggaggtttctcggcattcgggacggcgta
ccggtaaccctttaccggggtacgggatgccaacaatgcggaagtaccgggtaccggggg
cgtatggcgattcaggagatgctggtgatgacccagcaacagagaaaattggttcttgcc
cgggcccctgccaatgagcttaggcaatctgccattgaacaaggaatggtcaccattaca
caagacggcattcaaaaggcattaatcggtattaccaccatcgacgagatcatgcgcgtt
gcttctacggaagaactgtaa
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