Candidatus Formimonas warabiya: DCMF_03845
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Entry
DCMF_03845 CDS
T07208
Name
(GenBank) hypothetical protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
fwa
Candidatus Formimonas warabiya
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fwa03000
]
DCMF_03845
Transcription factors [BR:
fwa03000
]
Prokaryotic type
Helix-turn-helix
Other families
DCMF_03845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
PAS
AAA_5
PAS_9
Mg_chelatase
PAS_8
GAF
AAA
Diguanyl_cycl_sensor
AAA_2
PAS_4
AAA_3
NACHT
HTH_30
HTH_7
HTH_17
Motif
Other DBs
NCBI-ProteinID:
ATW24036
UniProt:
A0A3G1KNN2
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All DBs
Position
857125..859074
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AA seq
649 aa
AA seq
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MRFHYQAWEDFVIGRNTSKETSLVSPIILSSWQRCVNRHQSPDEVISSRVPEEEVNKRRT
VNQNLINVAKPFLEELYELVKGSGFTVVLLDQDACILEILGDQDFLERHKHFQTGEIWDE
ETKGTNAMGIVKIEKIPVQVYATEHYVRKNHNITCSGAPIRGANGEMIGILDVSGDFNKA
HAHTLGMVVAAVKAIQNELSLKAAHAEIIKSYNNVNAIIETISDGIVSFDEYGRITNMNP
VAIKILDVNGSNYQGKQLKSILKNDEIFDRILRNGRSIYDKEFLLERNHKQVHFLFSAQP
IIDHAKEICGGVANLREIKYVHRLINQMVGARALFTFEDIIGESASIKESIRIAKDIAAS
MSSIILQGESGTGKEMFAQAIHNESSFSLGPFMVINCGAIPRDLIESELFGYEDGAFTGA
KRGGRAGKFELANGGTIFLDEIGDMPLDTQVSLLRVLQEKQVVRIGGYKSIPINVRVIAA
TNKDIKEEVRKGNFREDLYYRLNVINITIPPLRKREGDILLLSKYYIKKCSTMLGYTVSN
LDPQAVRSLEEYYWPGNVRELANAMERAVNMAKGKEIALEHLPENLQKQTNLGKKKAKDP
HTLEKREKEIILETLEAVNWNISKGSSILGISRNTLYRKINKYEITMTG
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagatttcattatcaagcttgggaggatttcgttataggcagaaataccagcaaggaa
acctctttggtgagtcccattatcctgtcgtcctggcaacggtgtgtcaaccggcaccag
agccctgatgaggtcatttcttccagggtaccggaggaagaagtaaataaaagaagaact
gtcaatcaaaatctcattaacgttgccaaaccatttttagaggaattatatgaattggtg
aaagggtccggctttacagttgttctccttgatcaggatgcctgcattttggagatcttg
ggcgaccaggattttttagagcggcataagcatttccaaaccggtgagatttgggacgaa
gagacaaagggcacaaatgccatgggtatcgtaaaaatagaaaaaattccggttcaggta
tacgctacggagcactatgtgcggaaaaatcacaatatcacctgttccggcgctcccatc
cgcggcgccaatggagaaatgatcggcatcctagacgtgtccggagattttaacaaggcc
catgcccatactttaggcatggtggtagctgccgtcaaagcgattcaaaatgagcttagc
ctaaaagcggcccatgcggaaatcatcaagtcctataacaatgtgaacgcgattatcgaa
accatttccgacggcattgtttcttttgatgagtatggccgcatcacaaacatgaatcct
gtggcgattaagattttagacgtaaacggatccaattaccagggaaaacaattgaaaagt
attctgaagaacgatgaaatctttgatcgcatcctgcgcaacggccgaagcatttatgac
aaggaattccttctggaaagaaaccataaacaagtgcactttctcttttccgcccagccc
atcattgatcacgccaaagagatttgcggcggtgtagccaacctgagggaaattaaatac
gtgcaccggctgatcaaccaaatggtgggggcaagagctttgtttacctttgaagatatt
atcggcgaaagcgcctccatcaaagaaagcattcgaattgccaaagacattgcggccagt
atgtcctccatcattttacaaggcgaaagcggcaccggtaaagaaatgtttgctcaggcc
attcataatgagagcagtttttctctcggcccttttatggtgattaattgtggggccatc
ccgagagacctgatcgagagtgaactttttggctatgaagacggggcctttaccggagcc
aagcgggggggacgagccggtaaatttgagctggccaacggagggaccatcttccttgat
gagattggtgatatgcctttagatacccaagtatccctgttgcgcgtgcttcaggaaaaa
caggtggtacggatcggcgggtataagtccatacccatcaatgttcgggtcattgccgcc
accaacaaagatatcaaagaagaagtccggaaagggaatttccgggaggatctttactat
cgtttgaatgtgatcaatatcaccatacctcccctccgcaaaagggaaggagatattttg
ctcttatcaaaatactatattaaaaaatgttctaccatgctgggctatacggtgagtaat
ttggatccccaagctgtgcgctccctggaggagtattattggccgggaaatgtccgggag
cttgccaatgccatggaaagagcggtaaatatggcgaaaggaaaggaaattgctttagaa
catttgccggaaaatctgcaaaaacaaacaaatttgggaaagaagaaagcaaaggatccc
catacgttggaaaagagggaaaaagagattatcctggaaactttggaagcggttaactgg
aatatctcgaaaggctcttccattttagggatttcccggaataccctttaccggaaaatc
aataagtatgagatcacaatgacgggttaa
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