Candidatus Formimonas warabiya: DCMF_04235
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Entry
DCMF_04235 CDS
T07208
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
fwa
Candidatus Formimonas warabiya
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fwa03009
]
DCMF_04235
Enzymes [BR:
fwa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
DCMF_04235
Ribosome biogenesis [BR:
fwa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DCMF_04235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ATW28351
UniProt:
A0A3G1L125
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All DBs
Position
933900..934658
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AA seq
252 aa
AA seq
DB search
MQKILAHAGVASRRACEELILSGKVKIDGRVVTELGVKADPEQNVIEVDGKKITEMEKLI
YILLFKPAGYVSTVHDPQKRRTVLDLISGIKERVYPVGRLDYDTSGLLILTNDGQLTHEL
IHPSREVEKTYRAMVKGIPHSVSLKKLATGIELDDGKTAPAQVKIKKTDGDHALIDITIH
EGKNRQVRRMFTAVGHPVIWLKRIAFGFLDLGKMKPGEWRYLTKQEVERLKSLSKPKGPV
PGSRLPESGKTL
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
ctgcaaaaaattcttgcccatgccggtgtggcttcccggagagcctgtgaggaattgata
ctttcgggaaaagtaaagatagacggccgggtggtcacagaattaggtgtgaaagctgat
cctgaacaaaatgtcatcgaagtagatgggaaaaaaatcacggaaatggaaaaactgatc
tacatacttttgttcaaacctgccgggtatgtttctaccgtgcacgacccgcaaaaaaga
cgtactgtgctggatctaatcagcggaataaaggagcgggtttatccggtaggaagactg
gattatgatacttccggactattgattttaaccaatgacggtcaactgacccatgaactg
atccaccctagccgggaagtagaaaagacttatcgggccatggtaaaggggattccccac
agtgtcagcttaaagaaactggcaacaggaattgagctggacgatgggaaaaccgcccct
gcccaagtaaaaataaaaaagacagacggagatcatgctttaattgatattaccattcat
gaagggaaaaaccgtcaagtaaggcgtatgtttaccgcagtaggccatccggtgatttgg
cttaaacggatcgcctttggttttttggatttggggaaaatgaaaccgggagaatggaga
tatttaaccaaacaggaagtggagagattaaaaagcctgagcaagcctaaagggccggta
cccgggtcccggttaccggagtccgggaagaccctatag
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